Table 6.
The number of genes in top 50 highly discriminative subnetwork markers from tve_p method on GASOLINE categorized by their GO terms
| Ontology: Molecular function | |||
| GO term | GO id | GSE2034 | NKI295 |
| transporter activity | GO:0005215 | 240 | 251 |
| translation regulator activity | GO:0045182 | 37 | 41 |
| protein binding transcription factor activity | GO:0000988 | 35 | 42 |
| enzyme regulator activity | GO:0030234 | 193 | 205 |
| catalytic activity | GO:0003824 | 1146 | 1221 |
| channel regulator activity | GO:0016247 | 5 | 6 |
| receptor activity | GO:0004872 | 346 | 370 |
| nucleic acid binding transcription factor activity | GO:0001071 | 307 | 316 |
| antioxidant activity | GO:0016209 | 8 | 6 |
| structural molecule activity | GO:0005198 | 226 | 260 |
| binding | GO:0005488 | 1237 | 1330 |
| Ontology: Cellular component | |||
| GO term | GO id | GSE2034 | NKI295 |
| synapse | GO:0045202 | 15 | 15 |
| cell junction | GO:0030054 | 13 | 11 |
| membrane | GO:0016020 | 288 | 290 |
| macromolecular complex | GO:0032991 | 213 | 214 |
| extracellular matrix | GO:0031012 | 50 | 58 |
| cell part | GO:0044464 | 765 | 794 |
| organelle | GO:0043226 | 411 | 441 |
| extracellular region | GO:0005576 | 151 | 153 |
| Ontology: Biological process | |||
| GO term | GO id | GSE2034 | NKI295 |
| cellular component organization or biogenesis | GO:0071840 | 278 | 309 |
| cellular process | GO:0009987 | 1559 | 1679 |
| localization | GO:0051179 | 536 | 577 |
| apoptotic process | GO:0006915 | 174 | 194 |
| reproduction | GO:0000003 | 104 | 118 |
| biological regulation | GO:0065007 | 886 | 933 |
| response to stimulus | GO:0050896 | 547 | 593 |
| developmental process | GO:0032502 | 634 | 692 |
| rhythmic process | GO:0048511 | 3 | 1 |
| multicellular organismal process | GO:0032501 | 393 | 413 |
| locomotion | GO:0040011 | 20 | 24 |
| biological adhesion | GO:0022610 | 127 | 147 |
| metabolic process | GO:0008152 | 1773 | 1876 |
| growth | GO:0040007 | 1 | 3 |
| immune system process | GO:0002376 | 314 | 342 |