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. 2016 Apr 22;211(4):1412–1423. doi: 10.1111/nph.13983

Table 1.

Regions of the Fragaria chiloensis genome relevant to sex determination, showing notations used in text, synonyms, locations in reference genome, and methods used to characterize them

Region Synonyms Reference genome position Genotype method
All chromosomes Chromosomes are named based on one of the seven homeologous linkage groups (I–VII), one of subgenome contributors (Av, B1, B2, Bi), and the contributing parent (m, p); e.g. V‐Bi‐p Fvb1–7 Target capture
ZZ VI‐Av‐p, homogametic sex chromosomes Fvb6_0.000–38.873 Mb (entire) Target capture
ZW VI‐Av‐m, heterogametic sex chromosomes Fvb6_0.000–38.873 Mb (entire) Target capture
ZW pseudoautosomal region Pseudoautosomal region Fvb6_0.000–37.428 Mb, Fvb6_37.708–38.873 Mb Target capture
SDR vicinity Fvb6_37.378–38.873 Mb Fluidigm amplicons
Low maternal recombination region Fvb6_37.378–37.708 Mb Fluidigm amplicons
Female‐function region Fvb6_37.391–37.858 Mb Fluidigm amplicons
Sex‐determining region SDR, male‐function region Fvb6_37.428–37.708 Mb Fluidigm amplicons
High W divergence region Fvb6_37.565–37.708 Mb Fluidigm amplicons
Sex‐associated marker Fvb6_37594072 Fluidigm amplicons