Table III. Candidate FTi regulatory genes differentially regulated during the floral transition in leaves of the maize lines B77 and E2558W.
The table shows the identifier of the oligonucleotide on the microarray chip, transcript identifier (MaizeSequence version 4a.53) of the coding sequence from which the oligonucleotide was derived, and, for both lines, fold change (FC), P value, regulation, and annotation. Values were calculated between transcriptome data obtained from leaf samples at V3 and at 1 d before the transition of the SAM from vegetative to flowering meristem. MADS box TFs (MADS-TF) are indicated in boldface. POUF, Protein of unknown function.
| OPTIMAS Identifier | 4a.53 Coding Sequence | B77 |
E2558W |
Annotation | ||||
|---|---|---|---|---|---|---|---|---|
| FC | P | Regulation | FC | P | Regulation | |||
| OptiV1S24287 | GRMZM2G159105_T01 | 222.58 | 0.03 | Down | 56.78 | 0.02 | Down | Protein kinase family protein |
| OptiV1C11764 | GRMZM2G109627_T01 | 87.32 | 0.04 | Up | 6.34 | 0.02 | Up | PPR repeat-containing protein |
| OptiV1C02818 | GRMZM2G168898_T01 | 35.29 | 0.03 | Down | 8.82 | 0.04 | Down | HB2 (Hemoglobin2) |
| OptiV1N40037 | GRMZM2G006210_T01 | 11.87 | 0.04 | Down | 32.18 | 0.02 | Down | POUF |
| OptiV1S32916 | GRMZM2G061751_T01 | 10.30 | 0.05 | Down | 16.07 | 0.04 | Down | UNE1 (Unfertilized Embryo Sac1) |
| OptiV1S26715 | GRMZM2G052461_T01 | 8.95 | 0.03 | Up | 3.14 | 0.02 | Up | LHT2 (LYS-HIS TRANSPORTER2) |
| OptiV1C17237 | GRMZM2G171365_T01 | 7.07 | 0.05 | Up | 6.63 | 0.04 | Up | MADS-TF (MADS1) |
| OptiV1S31605 | GRMZM2G052034_T02 | 6.85 | 0.05 | Down | 8.50 | 0.04 | Down | Zinc finger (C3HC4-type RING finger) family protein |
| OptiV1S21916 | GRMZM2G046885_T02 | 6.29 | 0.03 | Up | 7.01 | 0.03 | Up | MADS-TF (M26) |
| OptiV1S19217 | GRMZM2G009475_T01 | 6.20 | 0.04 | Down | 4.71 | 0.02 | Down | POUF |
| OptiV1N35188 | AC233893.1_FGT001 | 5.66 | 0.05 | Down | 4.82 | 0.03 | Down | Homo-Cys S-methyltransferase |
| OptiV1C06771 | GRMZM2G179264_T01 | 5.60 | 0.03 | Up | 43.90 | 0.04 | Up | ZCN8 |
| OptiV1S20894 | GRMZM2G134502_T01 | 5.22 | 0.03 | Down | 5.02 | 0.03 | Down | Fiber annexin |
| OptiV1S29802 | GRMZM2G066291_T01 | 4.97 | 0.04 | Up | 3.84 | 0.02 | Up | POUF |
| OptiV1S33653 | GRMZM2G370777_T04 | 4.02 | 0.03 | Up | 3.72 | 0.04 | Up | MADS-TF (M19) |
| OptiV1C05996 | GRMZM2G370777_T05 | 3.87 | 0.04 | Up | 4.24 | 0.04 | Up | MADS-TF (M19) |
| OptiV1C09078 | GRMZM2G046885_T01 | 3.68 | 0.03 | Up | 3.59 | 0.05 | Up | MADS-TF (M26) |
| OptiV1C04175 | GRMZM2G128466_T02 | 3.30 | 0.05 | Up | 3.85 | 0.03 | Up | NQR (NADPH:QUINONE OXIDOREDUCTASE) |
| OptiV1S18918 | GRMZM2G107839_T01 | 2.72 | 0.04 | Down | 6.54 | 0.04 | Down | Putative LTP |
| OptiV1C03183 | GRMZM2G469898_T01 | 2.59 | 0.04 | Down | 4.99 | 0.03 | Down | GDSL motif lipase/hydrolase family protein |
| OptiV1S29722 | GRMZM2G101634_T01 | 2.39 | 0.03 | Down | 5.30 | 0.02 | Down | Ser/Thr protein phosphatase 2A, regulatory subunit |
| OptiV1C10635 | AC233935.1_FGT005 | 2.37 | 0.04 | Down | 5.41 | 0.04 | Down | OBP3 (OBF-BINDING PROTEIN3) |
| OptiV1S19635 | GRMZM2G055447_T01 | 2.32 | 0.03 | Up | 3.47 | 0.04 | Up | POUF |
| OptiV1C00462 | GRMZM2G174942_T02 | 2.21 | 0.03 | Up | 2.70 | 0.04 | Up | Eukaryotic translation initiation factor SUI1, putative |
| OptiV1C01938 | GRMZM2G443715_T01 | 2.06 | 0.04 | Up | 3.00 | 0.04 | Down | Mannan synthase |