Skip to main content
. Author manuscript; available in PMC: 2016 Oct 24.
Published in final edited form as: Biomed Microdevices. 2016 Aug;18(4):70. doi: 10.1007/s10544-016-0083-x

Table1.

Target genes assessed in the compartmentalized micro multi-culture device. Target genes, known to be deregulated, in breast cancer were selected based on review of the literature. This panel includes gene targets involved in proliferation, angiogenesis, and invasion and migration in tumor development and progression

List of Target Genes
Function Abbrev. Encoded Protein Ref.
Proliferation TGFB1 Transforming Growth Factor Beta 1 (Tobin et al. 2002; Muraoka et al. 2002)
Ligand FGF2 Basic Fibroblast Growth Factor (Penault-Llorca et al. 1995)
FGF1 Acidic Fibroblast Growth Factor (Penault-Llorca et al. 1995; Yoshimura et al. 1998)
HGF Hepatocyte Growth Factor (Tyan et al. 2011; Edakuni et al. 2001)
Angiogenesis VEGFa Vascular Endothelial Growth Factor A (Weigand et al. 2005)
Ligand PDGFα Platelet-derived Growth Factor alpha (Shao et al. 2000; Yu et al. 2015)
PDGFβ Platelet-derived Growth Factor beta (Shao et al. 2000; Frings et al. 2013)
Invasion & MMP9 Matrix Metalloproteinase 9 (Fleming et al. 2012; Nanda et al. 2013)
Migration MMP3 Matrix Metalloproteinase 3 (Nozaki et al. 2000)
MMP7 Matrix Metalloproteinase 7 (Fernandez-Garcia et al. 2014; DeLassus et al. 2011)
MMP1 Matrix Metalloproteinase 1 (DeLassus et al. 2011; Boström et al. 2011)
Invasion TIMP1 Tissue Inhibitor of Metalloproteinases 1 (Fernandez-Garcia et al. 2014; Peng et al. 2011)
Inhibitor TIMP2 Tissue Inhibitor of Metalloproteinases 2 (Fernandez-Garcia et al. 2014; Hsu et al. 2012)
Proliferation FGFR1 Fibroblast Growth Factor Receptor 1 (Penault-Llorca et al. 1995; Jacquemier et al. 1994)
Receptor FGFR2 Fibroblast Growth Factor Receptor 2 (Sungeun Kim et al. 2013a, 2013b)
TGFBR1 Transforming Growth Factor Beta Receptor 1 (Guido et al. 2012)
TGFBR2 Transforming Growth Factor Beta Receptor 2 (Busch et al. 2015; Tobin et al. 2002)
MET Met Proto-oncogene (Edakuni et al. 2001)
Angiogenesis FLT1 FMS-related Tyrosine Kinase 1 (Weigand et al. 2005)
Receptor KDR Kinase Insert Domain Receptor (Guo et al. 2010)