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Secondary structure estimation from CD spectra of McjD in various lipid conditions using Contin algorithm
The secondary structure of the McjD crystal structure (PDB codes 4PL0) was calculated using DSSP.
| Secondary structure estimation (%) | DDM | OGNG | PL | PG | PE | 4PL0 (DSSP) |
|---|---|---|---|---|---|---|
| α-Helix | 68.3 | 29.1 | 64.2 | 66.8 | 68.5 | 62 |
| β-Strand | 2.9 | 26.4 | 5.4 | 2.9 | 3.9 | 10 |
| Turns | 10.0 | 19.9 | 12.6 | 11.2 | 11.1 | 16 (turns and bend) |
| Unordered | 18.8 | 24.6 | 17.8 | 19 | 16.4 | 12 |
| Standard deviation | 0.012 | 0.043 | 0.037 | 0.021 | 0.033 |
