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. 2016 May 5;7(22):31738–31754. doi: 10.18632/oncotarget.9194

Table 1. RT-PCR analysis of liver gene expression following PHx in the Gal1-KO compared to WT mice.

Genes Hours post-PHx Il6-induced Inflam-mation Lipid meta-bolism Other
Gene symbol Gene ID NCBI Alternative name 2 6 24 2 h #
Acly 104112 Atpcl down NC V
Atf3 11910 Lrf1 down NC NC V
Ccl3 20302 Mip1a NC down V
Ccna1 12427 Cyclin A NC V
Ccr1 12768 Rantes-R down V
Cd14 12475 down down down V V
Cd36 12491 Fat NC* V V
Cidec 14311 Fsp27 NC down V
Crem 12916 Icer NC NC V
Egr1 13653 Ngfi-A NC NC NC V V
Fabp4 11770 Afabp down down V
Flt1 14254 Vegfr1 down* V
Fos 14281 c-Fos NC NC V V
Gadd45a 13197 Ddit1 NC NC NC V V
Hgf 15234 Sf NC* V
Hif1a 15251 Mop1 NC* V
Igfbp1 16006 Ibp1 NC NC V V
Il6 16193 Ifnb2 down NC NC V
Jun 16476 Ap-1c down NC NC V V
Kdr 16542 Vegfr2, Flk1 NC* V
Lgals1 16852 Galectin-1 ND ND ND* V
Lgals3 16854 Galectin-3 NC NC V
Lta 16992 Lymphotoxin α ND ND - V
Ltb 16994 Lymphotoxin β NC NC NC V
Ltbr 17000 Lymphotoxin β receptor down down NC V V
Map2k4 26398 Jnkk1, Mek4 Up NC NC V V
Myc 17869 c-Myc Up Up NC V V
Plau 18792 u-PA NC Up V V
Plin4 57435 S3-12 down down V
Ppara 19013 Ppar, Nr1c1 NC NC NC V
Saa1 20208 Saa-1 NC NC V
Socs3 12702 Cis3 NC NC V
Tgfb1 21803 Tgf-beta1 NC NC down* V
Thpo 21832 Thrombopoietin down NC V V
Tnf 21926 Tnf-alpha NC NC down V
Tnfaip3 21929 A20 NC Up down V V
Tnfsf14 50930 Light, Hveml NC NC NC V
Zfp36 22695 Tristetraprolin NC Up Up V V

NC - not changed (comparable expression in WT and Gal1-KO post-PHx livers)

ND - not detected; Up – up-regulated; down – down-regulated; − not tested

*

tested by semi-qRT-PCR; others were tested by qRT-PCR

“Up” or “down” at least two-fold in Gal1-KO compared to WT post-PHx liver is shown in bold

#

genes whose induction at 2 h post-PHx was IL6-dependent [Li, 2001 #1370].