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. 2016 Sep 15;12:133–142. doi: 10.1016/j.ebiom.2016.09.012

Table 1.

Primer information for genes and small RNAs.

Gene name Accession number Primer Location for the first nucleotide of the primera Sequence (from 5′ to 3′) Annealing temperature (°C)
EFNB2 NM_004093 Forward for RT-qPCR Chr13:106,494,962 GATCCAACAAGACGTCCAGAA 60
Reverse for RT-qPCR Chr13:106,493,342 CTGAAGCAATCCCTGCAAATA
3′-UTR Forward for mutationb Chr13:106,492,317 CGAGCTCAGTGGGGCTGGGGAAAGGGCT 58
3′-UTR Reverse for mutationb Chr13:106,491,818 GCTCTAGATGACCTTTGGCTTTTCAAC
rs550067317(C) Forward for mutation Chr13:106,491,988 TACTGGCACTAAGATACACAGCTCCGAGCT 58
rs550067317(C) Reverse for mutation Chr13:106,491,972 GTATCTTAGTGCCAGTACCACAACAGTCCT
GAPDH NM_002046 Forward for RT-qPCR Chr12:6,537,347 CCAAGGTCATCCATGACAACT 60
Reverse for RT-qPCR Chr12:6,537,683 CAGGGATGATGTTCTGGAGAG
Hsa-miR-137 NR_029679 Forward for RT-qPCR Chr1:98,046,113 TTATTGCTTAAGAATACGCGTAG 60
U6 snRNA NR_004394 Forward for RT-qPCR Chr15:67,840,042 CTCGCTTCGGCAGCACA 60
Reverse for RT-qPCR Chr15:67,839,949 AACGCTTCACGAATTTGCGT
a

UCSC Browser, Dec. 2013; http://genome,ucsc.edu/cgi-bin/hgGateway.

b

Several nucleotides (restriction enzyme cutting site) have been added to the 5′ terminal of the primer.