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. 2004 Jul 30;5(8):R60. doi: 10.1186/gb-2004-5-8-r60

Figure 2.

Figure 2

Intensity and spatial distribution of log ratios for local intensity-dependent normalization (LIN) with default model parameters. (a) The residuals of the local regression are well balanced around zero in the MA-plot. (b) Patterns of spatial bias are still apparent in the MXY-plot, whereas the lines of negative M corresponding to empty spots disappeared as a result of the intensity-dependent normalization.