Table 2.

Characteristics of SSR markers developed from rye DArT marker sequences.

SSR marker name	DArT sequence ID	Chromosomal locationa	Number of allels	Expected amplicon size [bp]	Allele size range [bp]	PIC value
SSR_400236_con	400236_con	1R	6	216	208-230	0.59
SSR_402546_con	402546_con	1R	6	161	155-184	0.73
SSR_402642_con	402642_con	1R	2	205	200-206	0.45
SSR_402421	402421	2R	7	249	215-250	0.65
SSR_508543_con	508543_con	2R	7	158	155-173	0.82
SSR_508929_1	508929	3R	3	203	190-212	0.74
SSR_508929_2	508929	3R	4	165	156-176	0.79
SSR_399980	399980	3R	8	131	121-139	0.79
SSR_509517	509517	4R	5	256	210-235	0.31
SSR_508692_con	508692_con	5R	6	215	198-218	0.72
SSR_505581	505581	5R	4	197	182-208	0.81
SSR_400330_con	400330_con	5R	2	168	161-170	0.79
SSR_401898_con	401898_con	6R	2	219	210-220	0.75
SSR_505949_con	505949_con	6R	4	164	157-171	0.73
SSR_508976	508976	7R	4	199	190-210	0.50
SSR_402502	402502	n.a.	7	185	173-192	0.64
SSR_398598	398598	n.a.	5	160	157-176	0.59
SSR_508416	508416	n.a.	4	222	203-224	0.81
SSR_390082	390082	n.a.	3	141	138-142	0.48
SSR_507134	507134	n.a.	4	138	134-148	0.54

^aChromosomal location of the DArT sequence from which the relevant SSR marker was developed.