Table 3.
Changes in biological processes in buds indentified by GO analysis during Stage I to Stage II transition.
| Change pattern | Gene ontology term | Cluster frequency (%) | P-value | Corrected P-value |
|---|---|---|---|---|
| Up-regulated | Histone lysine methylation | 3.0 | 1.78E-27 | 2.07E-24 |
| Cell division | 3.4 | 2.86E-27 | 3.33E-24 | |
| Microtubule-based process | 4.4 | 2.23E-26 | 2.60E-23 | |
| Peptidyl-lysine methylation | 3.1 | 3.37E-26 | 3.92E-23 | |
| Macromolecule methylation | 4.5 | 4.87E-25 | 5.67E-22 | |
| Cytoskeleton-dependent cytokinesis | 2.9 | 1.62E-24 | 1.89E-21 | |
| Cell cycle process | 5.3 | 1.83E-24 | 2.13E-21 | |
| Regulation of cell cycle phase transition | 1.5 | 2.20E-24 | 2.56E-21 | |
| Regulation of mitotic cell cycle phase transition | 1.5 | 2.20E-24 | 2.56E-21 | |
| Cytokinesis | 3.0 | 1.04E-23 | 1.21E-20 | |
| Down-regulated | Cellular response to acid chemical | 1.4 | 1.27E-06 | 0.00155 |
| Signal transduction | 7.9 | 2.71E-06 | 0.0033 | |
| Signaling | 8.0 | 3.11E-06 | 0.00378 | |
| Single organism signaling | 8.0 | 3.11E-06 | 0.00378 | |
| Energy derivation by oxidation of organic compounds | 1.0 | 4.80E-06 | 0.00584 | |
| Salicylic acid mediated signaling pathway | 0.9 | 5.54E-06 | 0.00674 | |
| Cellular response to salicylic acid stimulus | 0.9 | 5.54E-06 | 0.00674 | |
| Regulation of cell death | 1.6 | 6.18E-06 | 0.00752 | |
| Regulation of programmed cell death | 1.6 | 6.18E-06 | 0.00752 | |
| Response to salicylic acid | 0.9 | 7.33E-06 | 0.00892 |
Top 10 most significant processes are displayed.