Table 5.
Changes in biological processes in buds indentified by GO analysis during Stage III to Stage IV transition.
| Change pattern | Gene ontology term | Cluster frequency (%) | P-value | Corrected P-value |
|---|---|---|---|---|
| Up-regulated | Cell recognition | 1.4 | 2.86E-08 | 2.90E-05 |
| Glycolipid metabolic process | 1.4 | 1.22E-07 | 0.00012 | |
| Liposaccharide metabolic process | 1.4 | 1.22E-07 | 0.00012 | |
| Sulfate transport | 0.5 | 8.91E-07 | 0.0009 | |
| Sulfur compound transport | 0.5 | 8.91E-07 | 0.0009 | |
| Glycolipid biosynthetic process | 1.1 | 2.82E-06 | 0.00285 | |
| Response to salicylic acid | 1.1 | 5.49E-06 | 0.00556 | |
| Regulation of cell death | 1.8 | 6.96E-06 | 0.00704 | |
| Regulation of programmed cell death | 1.8 | 6.96E-06 | 0.00704 | |
| Salicylic acid mediated signaling pathway | 1.1 | 1.30E-05 | 0.01324 | |
| Down-regulated | Cell cycle process | 7.0 | 2.27E-46 | 2.61E-43 |
| Cell cycle | 8.6 | 1.41E-41 | 1.62E-38 | |
| Macromolecule methylation | 5.6 | 8.59E-40 | 9.87E-37 | |
| Methylation | 5.7 | 4.82E-39 | 5.54E-36 | |
| Regulation of DNA metabolic process | 3.5 | 1.18E-38 | 1.36E-35 | |
| Histone lysine methylation | 3.7 | 3.35E-37 | 3.85E-34 | |
| Peptidyl-lysine methylation | 3.8 | 1.66E-36 | 1.90E-33 | |
| Cell division | 4.1 | 4.10E-35 | 4.71E-32 | |
| Chromosome organization | 8.7 | 5.11E-35 | 5.87E-32 | |
| Cellular nitrogen compound metabolic process | 28.6 | 8.82E-34 | 1.01E-30 |
Top 10 most significant processes are displayed.