Table 1.
Homologs of meiotic genes deregulated in apomictic seedlings of Boechera.
| Arabidopsis locus ID | Locus name | Sex-1 FPKM | Apo-1 FPKM | Log2 Fold Change |
|---|---|---|---|---|
| Down-regulated in Apo-1 | ||||
| AT1G67370 | ASYNAPTIC 1 (ASY1) | 6.84 | 0.51 | -3.74 |
| AT3G20475 | MUTS-HOMOLOGUE 5 (MSH5) | 2.89 | 0.51 | -2.50 |
| AT3G52115 | GAMMA RESPONSE GENE 1 (GR1) | 1.20 | 0.09 | -3.80 |
| AT4G14180 | PUTATIVE RECOMBINATION INITIATION DEFECT 1 (PRD1) | 1.85 | 0.72 | -1.36 |
| AT4G35520 | MUTL PROTEIN HOMOLOG 3 (MLH3) | 2.48 | 1.14 | -1.12 |
| AT5G57880 | MULTIPOLAR SPINDLE 1 (MPS1) | 11.57 | 3.01 | -1.94 |
| Up-regulated in Apo-1 | ||||
| AT4G29170 | MEIOTIC NUCLEAR DIVISION PROTEIN1 (MND1) | 1.01 | 4.35 | 2.11 |
| AT4G00020 | BREAST CANCER 2 LIKE 2A (BRCA2(IV)) | 0.30 | 0.85 | 1.51 |
| AT5G01630 | BRCA2-LIKE B (BRCA2B) | 0.41 | 1.14 | 1.46 |
| AT5G57450 | HOMOLOG OF X-RAY REPAIR CROSS COMPLEMENTING 3 (XRCC3) (XRCC3) | 0.51 | 1.23 | 1.28 |
| AT3G27730 | ROCK-N-ROLLERS (RCK) | 0.19 | 0.45 | 1.25 |
| AT4G17380 | MUTS-LIKE PROTEIN 4 (MSH4) | 1.55 | 3.35 | 1.11 |