Table 2. Allelic richness, diversity and evenness of the 111 MLVA genotypes identified for the 190 C. glabrata samples isolated from yellow-legged gulls or humans were estimated for each study site.
Study site | N | MLG | eMLG | E5 | Corrected lambda | Clonal fraction |
---|---|---|---|---|---|---|
Pierre Blanche | 33 | 30 | 10.61 | 0.93 | 0.99 | 0.09 |
La Grande-Motte | 11 | 11 | 11.00 | 1.00 | 1.00 | 0.00 |
Palavas- les-Flots | 19 | 17 | 10.36 | 0.95 | 0.99 | 0.11 |
Riou | 14 | 12 | 9.79 | 0.94 | 0.98 | 0.14 |
Frioul | 34 | 25 | 10.05 | 0.92 | 0.98 | 0.26 |
Marseille | 39 | 31 | 10.29 | 0.90 | 0.99 | 0.21 |
Montpellier | 20 | 20 | 11.00 | 1.00 | 1.00 | 0.00 |
Nîmes | 20 | 18 | 10.28 | 0.90 | 0.98 | 0.10 |
Total | 190 | 131 | 10.62 | 0.74 | 0.99 | 0.31 |
Allelic richness was specified using the number of multilocus genotypes observed per population (MLG) and the number of expected MLG at the smallest sample size based on rarefaction (eMLG). Genetic evenness was estimated using the E5 index. Diversity was calculated using the Simpson’s (lambda) index corrected by the number of isolates in a population.