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. 2016 Oct 25;17:220. doi: 10.1186/s13059-016-1083-0
Cell line Localization RNA extract Read type Data version GEO sample accession
A549 Cell longPolyA 2x76D ENCODE Jan 2011 Freeze GSM758564
AG04450 Cell longPolyA 2x76D ENCODE Jan 2011 Freeze GSM758561
BJ Cell longPolyA 2x76D ENCODE Jan 2011 Freeze GSM758562
GM12878 Cell longPolyA 2x76D ENCODE Jan 2011 Freeze GSM758559
H1-hESC Cell longPolyA 2x76D ENCODE Jan 2011 Freeze GSM758566
HeLa-S3 Cell longPolyA 2x76D ENCODE Jan 2011 Freeze GSM765402
HepG2 Cell longPolyA 2x76D ENCODE Jan 2011 Freeze GSM758575
HSMM Cell longPolyA 2x76D ENCODE Jan 2011 Freeze GSM758578
HUVEC Cell longPolyA 2x76D ENCODE Jan 2011 Freeze GSM758563
IMR90 Cell longPolyA 2x101D ENCODE Mar 2012 Freeze GSM981249
K562 Cell longPolyA 2x76D ENCODE Jan 2011 Freeze GSM765405
MCF-7 Cell longPolyA 2x76D ENCODE Jan 2011 Freeze GSM765388
NHEK Cell longPolyA 2x76D ENCODE Jan 2011 Freeze GSM765401
NHLF Cell longPolyA 2x76D ENCODE Jan 2011 Freeze GSM765394
SK-N-SH Cell longPolyA 2x101D ENCODE Mar 2012 Freeze GSM981253