Table 3.
GMI1000 | Phylotype I | Phylotype II | Phylotype III | Phylotype IV | |||
---|---|---|---|---|---|---|---|
Gene | Protein | EP1 | YC45 | FQY_4 | PO82 | CMR15 | PSI07 |
RSc0608 | AvrA | 100/99 | 100/100 | 100/97 | 75/76 | 100/98 | 80/77 |
RSp0822 | AvrPphF | 100/99 | 100/99 | 100/97 | 99/70 | 96/93 | Absent |
RSc2139 | Awr1 | 100/99 | 100/99 | 100/99 | Absent | Absent | Absent |
RSp0099 | Awr2 | 100/99 | 100/99 | 100/99 | 100/83 | 100/95 | 100/85 |
RSp0847 | Awr4 | 100/99 | 100/99 | 100/99 | 100/83 | 100/94 | 100/86 |
RSp1024 | Awr5 | 100/99 | 100/99 | 100/99 | 97/86 | 100/96 | 98/88 |
RSp0914 | Gala1 | 100/99 | 100/99 | 100/99 | 47/67 | 71/67 | 100/93 |
RSp0028 | Gala3 | 100/98 | 100/98 | 100/98 | 95/74 | 100/91 | 99/79 |
RSc1801 | Gala5 | 100/99 | 100/99 | 100/99 | 99/77 | 100/93 | 99/82 |
RSc1356 | Gala6 | 100/98 | 100/87 | 100/87 | 92/81 | 100/85 | 98/83 |
RSc1357 | Gala7 | 99/99 | 100/99 | 100/98 | 96/76 | 99/77 | 93/85 |
RSp0877 | PopA | 100/98 | 100/96 | 100/95 | 100/79 | 99/88 | 93/84 |
RSp0842 | – | 100/99 | 100/99 | 100/99 | 100/90 | 100/97 | 100/93 |
RSc0826 | PopP1 | 100/94 | Absent | Absent | 100/94 | Absent | Absent |
RSc0868 | PopP2 | 100/99 | 100/99 | 100/99 | 100/81 | 100/79 | Absent |
RSc1839 | Skwp4 | 100/99 | 100/99 | 100/99 | 97/82 | 100/89 | 93/74 |
RSc1815 | Rip19 | 100/99 | 100/99 | 100/98 | Absent | Absent | 84/77 |
RSp0304 | Rip34 | 100/99 | 100/94 | 100/98 | 100/76 | 100/77 | 100/90 |
RSp0732 | Rip39 | 100/98 | 100/99 | 100/98 | 100/91 | 100/92 | Absent |
RSp1281 | Rip64 | 100/99 | 100/99 | 100/99 | 95/87 | 99/94 | 95/88 |
RSc0257 | Rip3 | 100/99 | 100/99 | 98/75 | 99/85 | 99/93 | 99/80 |
RSp1022 | Rip55 | 100/98 | 100/97 | 100/98 | 96/72 | 100/88 | 95/74 |
RSc2359 | Rip23 | 100/99 | 100/99 | 100/99 | Absent | Absent | Absent |
Identity (Id) | Id ≥ 90% | 80% ≤ Id < 90 | 70% ≤ Id < 80 | 60% ≤ Id < 70 | Absent |