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. 2016 Jul-Sep;8(3):103–110.

Table 2.

Localization of differentially methylated sites (DMSs) identified in a comparative analysis of DNA methylation of PBMCs from patients with different clinical courses of MS and healthy individuals (controls), regarding the CpG-islands of the human genome

DMS localization Number of DMS for different comparisons between the groups
RRMS vs control PPMS vs control PPMS vs RRMS
Any (total DMSs) 30 (100%) 67 (100%) 51 (100%)
In CpG-island 15 (50%) 42 (63%) 27 (53%)
In CpG-shore 3 (10%) 11 (16%) 9 (18%)
In CpG-shelf 6 (20%) 2 (3%) 5 (10%)
In open sea 6 (20%) 12 (18%) 10 (19%)

Note. Localization of individual CpG-sites in the CpG-island was determined using the UCSC-annotation, version hg19; CpG-shore is located up to 2 kbp from the CpG-island; CpG-shelf – up to 2 kbp from the CpG-shore; areas not related to the above three categories are designated as “Open sea.”