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Primers used to determine the presence of prophages.
| Name | Prophage | Forward | Reverse |
|---|---|---|---|
| A | ΦHSC5.1 | 5ΦHSC5.1 AGAAACAGGCGATGCCATAC |
3ΦHSC5.1 CATTCATTTCATCCGACAGC |
| B | ΦHSC5.2 | 5ΦHSC5.2 GTCCACCGCTAAATCGAGAC |
3ΦHSC5.2 ATTTCTCCACCGATTTCACG |
| C | ΦHSC5.3 | 5ΦHSC5.3 CAATTATGGGAGCGGCTATG |
3ΦHSC5.3 ATCAAATTCTGTCGCCCAAG |
| D | ΦHSC5.3 | 5ΦHSC5.3del TTGCCCTTCCGCATAAATAG |
3ΦHSC5.3del ATCAATGGTCCTCAAGGCAG |
Primers are listed in the 5’ to 3’ direction.
