Table 1.
Primer list of host-derived metabolic genes described in this study.
| Signature Gene | Function | Primer Sequence | References |
|---|---|---|---|
| psbA | Photosynthesis protein D1 | psbA-F: 5′-GTNGAYATHGAYGGNATHMGNGARCC-3′ psbA-R: 5′-GGRAARTTRTGNGCRTTNCKYTCRTGCAT-3′ |
[100] |
| Pro-psbA-F: 5′-AACATCATYTCWGGTGCWGT-3′ Pro-psbA-R: 5′-TCGTGCATTACTTCCATACC-3′ |
[58] | ||
| psbA-93F: 5′-TAYCCNATYTGGGAAGC-3′ psbA-341R: 5′-TCRAGDGGGAARTTRTG-3′ |
[109] | ||
| psbD | Photosynthesis protein D2 | psbD-26Fa: 5′-TTYGTNTTYRTNGGNTGGAGYGG-3′ psbD-26Fb: 5′-TTYGTNTTYRTNGGNTGGTCNGG-3′ |
[58] |
| psbD-54Fa: 5′-GTNACNAGYTGGTAYACNCAYGG-3′ psbD-54Fb: 5′-GTNACNTCNTGGTAYACNCAYGG-3′ |
[58] | ||
| psbD-308Ra: 5′-YTCYTGNGANACRAARTCRTANGC-3′ psbD-308Rb: 5′-YTCYTGRCTNACRAARTCRTANGC-3′ |
[58] | ||
| psbD-F: 5′-GGNTTYATGCTNMGNCARTT-3′ psbD-R: 5′-CKRTTNGCNGTVAYCAT-3′ |
[27] | ||
| cobS | Putative porphyrin biosynthetic protein | cobS-For: 5′-BACYGTWTGGCACAAYGG-3′ cobS-Rev: 5′-CTTRGTNTCMTCATCRAARCG-3′ |
[63] |
| mazG | Nucleoside triphosphate pyrophosphohydrolase | mazG-For: 5′-CTTCTTACTGCTGSYGTTGG-3′ mazG-Rev: 5′-TTATCKGTCRTCKRCWGATT-3′ |
[104] |
| phoH | Putative phosphate protein | vPhoHf: 5′-TGCRGGWACAGGTAARACAT-3′ vPhoHr: 5′-TCRCCRCAGAAAAYMATTTT-3′ |
[106] |
| phoH-For: 5′-GARATYGGDTTCYTDCCTGG-3′ phoH-Rev: 5′-ACWARWCCAGADCKWACRATRTC-3′ |
[63] |