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The new Bulgarian genomes placed in the phylogenetic framework of canSNPs. Four assays B.76 − B.79 were developed in this study to target subclades, where strains from Bulgaria were members. B.4, B.12, B.23, B.24, B.34, and B.35 have been previously published (5, 6, 20). Alternative canSNPs (B.17, B.19, and B.42) are indicated in gray below the first published canSNP in indicated branch (6, 19). s=the numbers of canSNPs on the indicated branch.
