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. 2016 Sep 26;18(4):514–531. doi: 10.22074/cellj.2016.4718

Table 2.

The top 20% genes with the best rank in degree, betweenness centrality, and closeness centrality parameters in the enriched proteinprotein interaction (PPI) network of time 24 hours


Geans Degree Geans Betweenness Geans Closeness

TP53 35 TP53 0.338181 TP53 0.397906
FN1 16 MMP2 0.171374 MMP2 0.38191
CTNNB1 15 ALB 0.145517 NOTCH1 0.361045
MMP2 15 CTNNB1 0.125341 ALB 0.356808
ALB 14 NOTCH1 0.11946 AR 0.35023
AR 14 SERPINE1 0.100643 CTNNB1 0.347032
NOTCH1 14 AR 0.085536 SERPINE1 0.344671
SHH 13 FN1 0.075905 SMAD2 0.334802
SMAD2 11 SHH 0.069747 FN1 0.333333
SERPINE1 10 SMAD2 0.069443 ACVR1B 0.326882
COL1A1 9 PRKAR2A 0.067309 ACVR2A 0.326882
PRKAR2A 9 HSPA5 0.067049 SHH 0.325482
MAPK1 9 MAP3K5 0.049224 CD9 0.324094
TGFBI 8 PTHLH 0.047677 MAPK1 0.319328
ACVR1B 8 HRAS 0.045799 NCOR1 0.316667
IFNG 8 TGFBI 0.044403 LAMC2 0.31405
TCF4 8 HNF1B 0.040631 VTN 0.312115
ACVR2A 8 CDKN2A 0.039982 FAS 0.310838
FAS 7 NCOR1 0.039374 TCF4 0.310204
BDNF 7 PAX6 0.038418 SOD2 0.308943
CD9 6 CD9 0.038417 CTBP1 0.307692
LAMC2 6 TCF4 0.037912 PAX6 0.306452
CTBP1 6 NR0B1 0.035918 HES1 0.306452
PAX6 6 FAS 0.035234 HSPA5 0.305835
HES1 6 MAPK1 0.031996 IFNG 0.305221
CSF2 6 NEDD4L 0.030261 KDM1A 0.305221
NR0B1 6 SLC9A3R2 0.028821 TGFBI 0.304609
HNF1B 6 IFNG 0.028734 CSF2 0.304609
LRP2 6 CSF2 0.027151 PRKAR2A 0.304
TRAF2 6 ANXA2 0.026874 DECR1 0.303393
RIPK1 6 PROC 0.026277 PPP2R1A 0.302187
NCOR1 5 KDR 0.024832 DECR1 0.303393
VTN 5 CTBP1 0.024626 PPP2R1A 0.302187
SOD2 5 APOB 0.024534 COL1A1 0.30099
HSPA5 5 TRAF2 0.024347 BDNF 0.298625
CDKN2A 5 F3 0.022625 TDGF1 0.295146
HRAS 5 BDNF 0.022597 F7 0.294574
CYP7A1 5 LRP2 0.022317 NR0B1 0.293436
KDR 5 COL2A1 0.022231 HNF1B 0.292308
ID2 5 GSTA1 0.021794 CDKN2A 0.291747
MAP3K5 5 VTN 0.021145 DUSP5 0.290631
CLU 5 ARF6 0.020175 LRP2 0.290076
NEDD4L 5 YWHAB 0.01996 ANXA2 0.289524
FST 5 ACVR1B 0.018667 F3 0.288425
MSTN 5 ACVR2A 0.018667 PTHLH 0.287335
PROC 5 RALA 0.018621 HRAS 0.286792