Table 1:
Ethanol-induced changes in NFKB/REL gene targets in mouse brain
| CeA | NAc | PFC | |||
|---|---|---|---|---|---|
| Illumina probe ID | NFKB/REL targets (IPA) | Illumina probe ID | NFKB/REL targets (IPA) | Illumina probe ID | NFKB/REL targets (IPA) |
| ILMN_2738825 | ACTA1 | ILMN_2878060 | ANXA6 | ILMN_2878060 | ANXA6 |
| ILMN_2739999 | B2M | ILMN_2739999 | B2M | ILMN_1221503 | CCND1 |
| ILMN_1216746 | B2M | ILMN_1216746 | B2M | ILMN_2601471 | CCND1 |
| ILMN_2717613 | CDK2 | ILMN_2706514 | BCL2 | ILMN_2931411 | CCT3 |
| ILMN_2756435 | CEBPB | ILMN_2716567 | BNIP3L | ILMN_2846775 | CDKN1A |
| ILMN_2609813 | CHI3L1 | ILMN_2756435 | CEBPB | ILMN_2634083 | CDKN1A |
| ILMN_1224754 | CKB | ILMN_2959480 | EIF4A1 | ILMN_2846776 | CDKN1A |
| ILMN_2747651 | HAT1 | ILMN_2718815 | FAF1 | ILMN_2992403 | CINP |
| ILMN_2624153 | HES5 | ILMN_2994806 | H2AFJ | ILMN_2627041 | CX3CL1 |
| ILMN_1253414 | HES5 | ILMN_2648292 | H3F3A/H3F3B | ILMN_1256348 | DNTTIP1 |
| ILMN_2791952 | HES6 | ILMN_1253414 | HES5 | ILMN_2737713 | EDN1 |
| ILMN_1222313 | HIST1H4J | ILMN_2791952 | HES6 | ILMN_2903945 | GADD45G |
| ILMN_2924419 | HLA-A | ILMN_2855315 | HIST1H1C | ILMN_2791952 | HES6 |
| ILMN_2835683 | HLA-A | ILMN_2924419 | HLA-A | ILMN_2835683 | HLA-A |
| ILMN_1235470 | HNRNPC | ILMN_2835683 | HLA-A | ILMN_3156604 | HMGB2 |
| ILMN_1239021 | HNRNPM | ILMN_2715802 | HMGA1 | ILMN_2664319 | IRF3 |
| ILMN_2646625 | JUN | ILMN_1235470 | HNRNPC | ILMN_2646625 | JUN |
| ILMN_2878071 | LYZ | ILMN_2511051 | HNRNPC | ILMN_3001914 | NFKBIA |
| ILMN_2640883 | NDE1 | ILMN_2921103 | HNRNPM | ILMN_2596979 | NRARP |
| ILMN_2596979 | NRARP | ILMN_2921095 | HNRNPM | ILMN_3158919 | PRKCZ |
| ILMN_1242466 | PSMB9 | ILMN_1239021 | HNRNPM | ILMN_2647533 | SLC41A3 |
| ILMN_2717621 | RPS15A | ILMN_2646625 | JUN | ILMN_2938893 | SMAD3 |
| ILMN_2883164 | SERPINE2 | ILMN_1258376 | KCNK6 | ILMN_2701664 | TSC22D3 |
| ILMN_2701664 | TSC22D3 | ILMN_1258526 | LGALS3BP | ILMN_3150811 | TSC22D3 |
| ILMN_3150811 | TSC22D3 | ILMN_2878071 | LYZ | ILMN_3112873 | TXNIP |
| ILMN_3121255 | VEGFA | ILMN_2640883 | NDE1 | ||
| ILMN_2596979 | NRARP | ||||
| ILMN_2790181 | PHGDH | ||||
| ILMN_1234766 | PPME1 | ||||
| ILMN_2833378 | PRKACA | ||||
| ILMN_1242466 | PSMB9 | ||||
| ILMN_1248316 | PTGDS | ||||
| ILMN_2728729 | SDC4 | ||||
| ILMN_3027751 | SORBS1 | ||||
| ILMN_2988299 | SRF | ||||
| ILMN_2692615 | TGM2 | ||||
| ILMN_2701664 | TSC22D3 | ||||
| ILMN_3150811 | TSC22D3 | ||||
| ILMN_3112873 | TXNIP | ||||
Ethanol administration produced numerous changes in NFKB/REL gene targets in mouse CeA, NAc, and PFC. IPA was used to curate gene targets. Gene target identification included both human and mouse databases. Human nomenclature is used here. Adjusted p values are listed using an FDR of p < 0.001. Experimental details are provided in the study by Osterndorff-Kahanek et al. (2015).