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. 2016 Oct 31;6:135. doi: 10.3389/fcimb.2016.00135

Table 4.

Parameters for 3D modeling, refinement, and validation of the fusion proteins.

Fusion protein Refinement cycle Minimization energy (ΔG) (kcal/mol) Ramachandran plot (%) Z-score RMSD (FimH-PapG)
FC 10 −11,912.82 94.70 −6.97 1.81 Ȧ−NA
CP 10 −7040.78 92.30 −7.7 NA−2.02 Ȧ
PF 10 −7140.54 92.40 −7.7 1.83 Ȧ−1.37 Ȧ
FCP 10 −13,866.68 93.10 −9.53 1.67 Ȧ−1.62 Ȧ
CPF 10 −13,343.83 92.50 −10.72 1.99 Ȧ−2.02 Ȧ
PFC 10 −13,577.65 91.90 −10.68 1.88 Ȧ−1.38 Ȧ

Calculations for RMSD were generated with the FimH-lectin domain (PDB 1TR7) and PapG-lectin domain (PDB 1J8R). NA, not applicable.