Table 2.
NCBI gene locus ID | Expression (RPKM) | Differential expression (log2-fold change) | Gene product | |||
---|---|---|---|---|---|---|
48hC | 48hI | 144hI | 48hCx48hI | 48hIx144hI | ||
MANI_029058 | 0.00 | 0.34 | 0.34 | NA | NA | Hypothetical protein |
MANI_018942 | 1.75 | 0.00 | 5.75 | NA | NA | Hypothetical protein |
MANI_029071 | 0.00 | 209.91 | 134.67 | 9.77 | ND | Integral membrane protein |
MANI_018916 | 0.55 | 492.48 | 212.39 | 9.64 | −1.28 | Cytochrome P450 |
MANI_018955 | 1.03 | 37.39 | 59.92 | 5.02 | ND | Hypothetical protein |
MANI_018958 | 2.21 | 355.01 | 165.40 | 7.30 | −1.10 | Phytanoyl-CoA dioxygenase |
MANI_018941 | 1.92 | 422.89 | 226.54 | 7.76 | ND | Phytanoyl-CoA dioxygenase |
MANI_018928 | 0.00 | 63.24 | 30.65 | 8.67 | −1.06 | C6 finger transcription factor |
MANI_018959 | 1.84 | 986.40 | 323.46 | 8.90 | −1.57 | Hypothetical protein |
MANI_018934 | 0.65 | 268.46 | 62.03 | 8.51 | −2.11 | Alpha/beta hydrolase |
MANI_018878 | 0.44 | 736.13 | 182.13 | 10.78 | −1.96 | Hybrid NRPS/PKS enzyme |
MANI_018952 | 0.00 | 1129.61 | 347.42 | 12.26 | −1.68 | Methyltransferase |
MANI_029062 | 0.00 | 286.33 | 99.09 | 11.23 | −1.50 | Cytochrome P450 |
MANI_120428 | 31.50 | 117.64 | 50.96 | 2.02 | −1.25 | Methionine aminopeptidase |
MANI_029068 | 109.68 | 117.21 | 86.21 | ND | ND | Methionine aminopeptidase |
MANI_018894 | 0.00 | 131.20 | 48.31 | 10.56 | −1.38 | Acetate-CoA ligase |
MANI_111428 | 0.98 | 599.02 | 205.75 | 9.29 | −1.51 | Steroid monooxygenase |
MANI_018962 | 0.00 | 269.62 | 67.44 | 9.55 | −1.94 | Hypothetical protein |
MANI_018945 | 0.00 | 15.06 | 4.25 | NA | NA | Methyltransferase |
MANI_018943 | 0.00 | 296.14 | 80.09 | 10.19 | −1.81 | Glutathione S-transferase |
MANI_018919 | 0.74 | 889.71 | 213.01 | 10.07 | −2.08 | O-methyltransferase |
The relative changes in expression levels were estimated at 48 h for the control condition (hC) and both 48 and 144 h for infection conditions (hI). NA Not Available, ND No Difference