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. 2016 Sep 16;214(10):1579–1587. doi: 10.1093/infdis/jiw420

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© The Author 2016. Published by Oxford University Press for the Infectious Diseases Society of America

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.

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Figure 1. — A, Maximum likelihood whole-genome-sequence phylogeny of 1102 Neisseria gonorrhoeae isolates, based on single nucleotide polymorphisms from mapping to the FA1090 reference genome. The coloring in the clades reflects the groups predicted from Bayesian analysis of population structure (BAPS). The black hashes in the 3 outer rings reflect (from inner to outer rings) reduced susceptibility to the extended-spectrum cephalosporins (ESCs), reduced susceptibility to azithromycin (AZI), and ciprofloxacin (CIP) resistance. B, Plot of cumulative fraction of isolates for the ESCs, AZI, and CIP by number of BAPS groups.

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