Antibodies |
|
|
Mouse monoclonal anti-GFP (clone 7.1 and 13.1) antibody |
Roche |
Cat#11814460001; RRID: AB_390913 |
Mouse monoclonal anti-Hif1α (clone #241809) antibody |
R&D Systems |
Cat#MAP1536; RRID: AB_2116983 |
Rabbit polyclonal anti-CRY2 |
Bethyl Laboratories |
Cat#A302-615A; RRID: AB_10554665 |
Mouse monoclonal anti-β-Catenin |
BD Biosciences |
Cat#610154; RRID: AB_397555 |
Rabbit polyclonal anti-Skp1 antibody |
Cell Signaling |
Cat#2156; RRID: AB_2270271 |
Rabbit polyclonal anti-Skp2 antibody |
Cell Signaling |
Cat#4313; RRID: AB_2187641 |
Rabbit polyclonal anti-Cul1 antibody |
Invitrogen |
Cat#71-8700; RRID: AB_87955 |
Rabbit monoclonal anti-β-TrCP (clone D13F10) antibody |
Cell Signaling |
Cat#4394S; RRID: AB_1054763 |
Mouse monoclonal anti-Sec31A (clone 32/Sec31A) antibody |
BD Biosciences |
Cat#612350; RRID: AB_399716 |
Mouse monoclonal anti-KLHL12 (clone 2G2) antibody |
Thermo Fisher |
Cat#MA5-15649; RRID: AB_11004907 |
Rabbit monoclonal anti-phospho-NF-κB p65 (Ser536) (clone 93H1) antibody |
Cell Signaling |
Cat#3033L; RRID: AB_331285 |
Mouse monoclonal anti-IκBα (clone L35A5) antibody |
Cell Signaling |
Cat#4814S; RRID: AB_10693636 |
Rabbit polyclonal anti-Cul2 antibody |
Thermo Fisher |
Cat#51-1800;RRID: AB_2533898 |
Mouse monoclonal anti-PCNA (clone PC10) antibody |
Sigma-Aldrich |
Cat#P8825; RRID: AB_477413 |
Goat polyclonal anti-ARIH1 antibody |
Abcam |
Cat#ab3891; RRID:AB_304129 |
Mouse monoclonal anti-HIF1α αντιβοδψ |
BD Biosciences |
Cat#610958; RRID:AB_398271 |
Rabbit polyclonal anti-NEDD8 antibody |
Cell Signaling |
Cat#2745S; RRID:AB_10695300 |
Rabbit monoclonal anti-p27 (Kip1) antibody |
Cell Signaling |
Cat#3686S; RRID:AB_2077850 |
Mouse monoclonal anit-Cyclin E1 antibody |
Cell Signaling |
Cat#4129S; RRID:AB_2071200 |
Anti-Flag M2 Magnetic Beads |
Sigma |
Cat#M8823 |
Mouse monoclonal anti-Tubulin antibody |
Sigma |
Cat#T9026; RRID:AB_477593 |
Rabbit polyclonal anti-CRY1 antibody |
Bethyl |
Cat#A302-614; RRID:AB_10555376 |
Chemicals, Peptides, and Recombinant Proteins |
MG132 Proteasome inhibitor |
InvivoGen |
Cat#tlrl-mg132; CAS: 133407-82-06 |
TNF (murine recombinant) |
Peprotech |
Cat#315-01A |
Tetracycline |
Bioline |
Cat#BIO-87030; CAS: 64-75-5 |
1,10-Phenanthroline |
Sigma-Aldrich |
Cat#131377-5G; CAS: 66-71-7 |
HALT protease and phosphatase inhibitor cocktail |
Thermo Fisher |
Cat#78441 |
Fluorescein-5-Maleimide |
Thermo Fisher |
Cat#F150 |
Tetramethylrhodamine-5-Maleimide (single isomer) |
Thermo Fisher |
Cat#T6027 |
Hoechst Solution |
Thermo Fisher |
Cat#62249 |
Blasticidin S HCl |
Thermo Fisher |
Cat#A1113903 |
Zeocin Selection Reagent |
Thermo Fisher |
Cat#R25001
|
Hygromycin B |
Thermo Fisher |
Cat#10687010 |
Puromycin Dihydrochloride |
Thermo Fisher |
Cat#A1113803 |
Roche mini complete EDTA free |
Roche |
Cat#11836170001 |
Roche complete |
Roche |
Cat#4693116001 |
phosSTOP inhibitor |
Roche |
Cat#04-906-837-001 |
1,10-Phenanthroline |
Sigma |
Cat#131377 |
MLN4924 |
EMD Millipore |
Cat#5054770001 |
3x FLAG Peptide |
LabPe |
Cat#L1033 |
TMT10plex Label Reagent Set |
Thermo Fisher |
Cat#90406 |
TMT6plex Label Reagent Set |
Thermo Fisher |
Cat#90068 |
Trypsin Gold, MS grade |
Promega |
Cat#V5280 |
Lysyl Endopeptidase |
Wako Chemicals |
Cat#129-02541 |
Gateway LR Clonase Enzyme mix |
Thermo Fisher |
Cat#11791019 |
Experimental Models: Cell Lines |
U2-OS |
ATCC |
ATCC#HTB-96; RRID:CVCL_0042 |
Flp-In T-Rex 293 Cell Line |
Thermo Fisher |
Cat#R78007; RRID:CVCL_U427 |
HEK293T |
ATCC |
ATTC#CRL-3216; RRID:CVCL_0063 |
Experimental Models: Organisms/Strains |
E. coli BL21 Gold (DE3) |
Thermo Fisher |
Cat#50-125-348 |
E. coli Rosetta 2 (DE3) |
EMD Millipore |
Cat#71400 |
Sf9 Insect cells |
Thermo Fisher |
Cat#11496015 |
High Five Insect cells |
Thermo Fisher |
Cat#B85502
|
Recombinant DNA |
pGEX4T1 GST-Thrombin-UBCH5B |
Duda et al., 2008
|
N/A |
pGEX4T1 GST-Thrombin-UBCH7 |
Duda et al., 2013
|
N/A |
pGEX4T1 GST-Thrombin-UBC12 |
Duda et al., 2008
|
N/A |
pGEX4T1 GST-Thrombin-UBE2F |
Duda et al., 2008
|
N/A |
pGEX4T1 GST-Thrombin-APPBP1-UBA3 |
Duda et al., 2008
|
N/A |
pGEX4T1 GST-Thrombin-RBX1:His-Thrombin-CUL1CTD
|
Duda et al., 2008
|
N/A |
pGEX4T1 GST-Thrombin-RBX1:His-Thrombin-CUL1ΔWHB
|
Duda et al., 2008
|
N/A |
pGEX4T1 GST-Thrombin-RBX1ΔRING:His-Thrombin-CUL1CTD
|
Duda et al., 2008
|
N/A |
pGEX4T1 GST-Thrombin-RBX1(W35A):His-Thrombin-CUL1CTD
|
Scott et al., 2014
|
N/A |
pGEX4T1 GST-Thrombin-RBX1(D36P):His-Thrombin-CUL1CTD
|
This Study |
N/A |
pGEX4T1 GST-Thrombin-RBX1(I37A):His-Thrombin-CUL1CTD
|
Duda et al., 2008
|
N/A |
pGEX4T1 GST-Thrombin-RBX1(V38P):His-Thrombin-CUL1CTD
|
Duda et al., 2008
|
N/A |
pGEX4T1 GST-Thrombin-RBX1(V39G):His-Thrombin-CUL1CTD
|
Duda et al., 2008
|
N/A |
pGEX4T1 GST-Thrombin-RBX1(D40G):His-Thrombin-CUL1CTD
|
Duda et al., 2008
|
N/A |
pGEX4T1 GST-Thrombin-RBX1(N41G):His-Thrombin-CUL1CTD
|
Duda et al., 2008
|
N/A |
pGEX4T1 GST-Thrombin-RBX1(N47A:H48A):His-Thrombin-CUL1CTD
|
This Study |
N/A |
pGEX4T1 GST-Thrombin-RBX1(D51A):His-Thrombin-CUL1CTD
|
This Study |
N/A |
pGEX4T1 GST-Thrombin-RBX1(I54A):His-Thrombin-CUL1CTD
|
This Study |
N/A |
pGEX4T1 GST-Thrombin-RBX1(Q57A):His-Thrombin-CUL1CTD
|
This Study |
N/A |
pGEX4T1 GST-Thrombin-RBX1(F81N):His-Thrombin-CUL1CTD
|
This Study |
N/A |
pGEX4T1 GST-Thrombin-RBX1(T90A:R91A):His-Thrombin-CUL1CTD
|
This Study |
N/A |
pGEX4T1 GST-Thrombin-RBX1(V93R):His-Thrombin-CUL1CTD
|
This Study |
N/A |
pGEX4T1 GST-Thrombin-RBX1(N98Q):His-Thrombin-CUL1CTD
|
This Study |
N/A |
pGEX4T1 GST-Thrombin-RBX1(E102V):His-Thrombin-CUL1CTD
|
This Study |
N/A |
pGEX4T1 GST-Thrombin-RBX1(F103V):His-Thrombin-CUL1CTD
|
This Study |
N/A |
pGEX4T1 GST-Thrombin-RBX1(Y106I):His-Thrombin-CUL1CTD
|
This Study |
N/A |
pGEX4T1 GST-Thrombin-RBX1(H108K):His-Thrombin-CUL1CTD
|
This Study |
N/A |
pGEX4T1 GST-Thrombin-RBX1N-RBX2RING:His-Thrombin-CUL1CTD
|
This Study |
N/A |
pGEX4T1 GST-Thrombin-RBX2N-RBX1RING:His-Thrombin-CUL1CTD
|
This Study |
N/A |
pAL His-Thrombin-CUL1NTD
|
Duda et al., 2008
|
N/A |
pGEX4T1 GST-Thrombin-CKS1 (5-73) |
Duda et al., 2008
|
N/A |
pGEX4T1 GST-Thrombin-NEDD8 |
Duda et al., 2008
|
N/A |
pGEX4T1 GST-Thrombin-NEDD8 (Q40E) |
This Study |
N/A |
pGEX2TK GST-Thrombin-UB (S > C) |
Scott et al., 2014
|
N/A |
pGEX2TK GST-Thrombin-UB (S > C) (I44A) |
This Study |
N/A |
pGEX2TK GST-Thrombin-UB (S > C) (L71A) |
This Study |
N/A |
pGEX2TK GST-Thrombin-UB (S > C) (L73A) |
This Study |
N/A |
pGEX2TK GST-Thrombin-UB (S > C) (LR74A) |
This Study |
N/A |
pGEX2TK GST-Thrombin-UBK0 (S > C) |
This Study |
N/A |
pGEX4T1 GST-TEV-CDC34B |
Duda et al., 2008
|
|
pGEX4T1 GST-TEV-CUL1CR3-C:His-MPB-TEV-RBX1 (CUL1 residues 332-C) |
This Study |
N/A |
pGEX4T1 GST-TEV-CUL1CTD:His-MPB-TEV-RBX1 (CUL1 residues 441-C) |
Jubelin et al., 2010
|
N/A |
pGEX4T1 GST-TEV-SKP2101-C:SKP1 |
Duda et al., 2008
|
N/A |
pGEX4T1 GST-TEV-FBW7ΔD:SKP1 (FBW7 residues 263-C) |
Jubelin et al., 2010
|
N/A |
pGEX4T1 GST-TEV CYCLINA |
Duda et al., 2008
|
N/A |
pGEX4T1 GST-TEV-CDK2:CIV1 |
Duda et al., 2008
|
N/A |
pRSFDUET His-TEV-p27 (S10A:F62A:F64A) |
Duda et al., 2008
|
N/A |
pRSFDUET His-TEV-p27 K > R (All LYS Mutated to ARG; DNA insert synthesized by Open Biosystems) |
Open Biosystems |
N/A |
pRSFDUET His-TEV-p27 K > R (S10A:F62A:F64A: K > R All LYS mutated to ARG) |
This Study |
N/A |
pRSFDUET His-TEV-p27 K > R(R25K) (S10A:F62A:F64A) |
This Study |
N/A |
pRSFDUET His-TEV-p27 K > R(R47K) (S10A:F62A:F64A) |
This Study |
N/A |
pRSFDUET His-TEV-p27 K > R(R59K) (S10A:F62A:F64A) |
This Study |
N/A |
pRSFDUET His-TEV-p27 K > R(R68K) (S10A:F62A:F64A) |
This Study |
N/A |
pRSFDUET His-TEV-p27 K > R(R75K) (S10A:F62A:F64A) |
This Study |
N/A |
pRSFDUET His-TEV-p27 K > R(R81K) (S10A:F62A:F64A) |
This Study |
N/A |
pRSFDUET His-TEV-p27 K > R(R96K) (S10A:F62A:F64A) |
This Study |
N/A |
pRSFDUET His-TEV-p27 K > R(R100K) (S10A:F62A:F64A) |
This Study |
N/A |
pRSFDUET His-TEV-p27 K > R(R134K) (S10A:F62A:F64A) |
This Study |
N/A |
pRSFDUET His-TEV-p27 K > R(R153K) (S10A:F62A:F64A) |
This Study |
N/A |
pRSFDUET His-TEV-p27 K > R(R165K) (S10A:F62A:F64A) |
This Study |
N/A |
pRSFDUET His-TEV-p27 K > R(R189K) (S10A:F62A:F64A) |
This Study |
N/A |
pRSFDUET His-TEV-p27 K > R(R190K) (S10A:F62A:F64A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 |
Duda et al., 2013
|
N/A |
pGEX4T1 GST-TEV-ARIH190-C (ARIH1 residues 90-C) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (R118A:E119A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (V123D) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (Q125) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (I130A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (H137A:N139A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (E143A:K144A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (E147A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (Y149A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (F150A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (N153A:L154A:E155A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (K156A:L157A:F158A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (E160A:C161A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (H162A:V163A:I164A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (N165A:P166A:S166A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (K168A:K169A:S170A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (R171A:T172A:R173A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (Q174A:M175A:N176A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (T177A:R178A:S179A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (I188A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (D241A:D242A:N243A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (T244A:V245A:M246A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (R247A:L248A:I249A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (T250A:D251A:S252A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (K253A:V254A:K255A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (K257A:Y258A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (Q259A:H260A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (L261A:I262A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (T263A:N264A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (S265A:F266A:V267A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (E268A:C269A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (N270A:R271A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (L272A:L273A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (K274A:W275A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (P279A:D280A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (H282A:H283A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (Q288A:Y289A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (D291A:K293A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (R296A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (K298A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (Q302A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (D313A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (W319A:L320A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (K321A:K322A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (W323A:I324A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (K325A:K326A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (C327A:D328A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (D329A:D330A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (S331A:E332A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (T333A:S334A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (N335A:W336A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (N340A:T341A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (K342A:E343A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (P345A:K346A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (H348A:V349A:T350A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (I351A:E352A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (N358A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (H359A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (M360A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (V361D) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (R363A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (N364A:Q365A:N366A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (K368A:E370A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (W373A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (V374A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (P378A:W379A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (E380A:P381A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (G383D:S384D:A385D) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (W386A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (N388A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (N390A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (R391A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (Y392A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (D395A:D396A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (A397D:K398I:A399V) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (A400N:R401Q:D402S) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (A403Q:E405A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (Q412A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (L415A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (Y417A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (N419A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (R420A:N423A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (H424A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (R429A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (F430A:E431A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (H432A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (Y435A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (M455A:Q456A:Q457A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (W452A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (K483A:K484A:N485A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (Y476A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (N486A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (I489A:I490A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (E492A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (N493A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (Q495A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (D497A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (E499A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (N500A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (K522A:Q523A:K524A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (Q526A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (R530A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (Y531A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (R535A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (R537A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (H452A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (Y547A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (F430A:E431A:N503A) Open Mutant A |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (R420A:N423A:N503A) Open Mutant B |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (V123D:R420A:N423A:N503A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (K156A:L157A:F158A:R420A:N423A:N503A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (I188A:R420A:N423A:N503A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (K257A:Y258A:R420A:N423A:N503A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (S265A:F266A:V267A:R420A:N423A:N503A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (N340A:T341A:R420A:N423A:N503A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (IT350A:I351A:R420A:N423A:N503A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (P378A:W379A:R420A:N423A:N503A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (W386A:R420A:N423A:N503A) |
This Study |
N/A |
pGEX4T1 GST-TEV-ARIH1 (Y531A:W379A:R420A:N423A:N503A) |
This Study |
N/A |
pMal MBP-TEV-KLHL12-His |
Jin et al., 2012
|
N/A |
pFastbac1 CUL1 |
This Study |
N/A |
pFastbacHTB His-TEV-CUL3 |
This Study |
N/A |
pFastbac1 SKP1 |
This Study |
N/A |
pFastbac GST-TEV-FBXL3 |
This Study |
N/A |
pFastbac GST-TEV-RBX1 |
This Study |
N/A |
pFastbac1 CRY1ΔC (CRY1 residues 1-532) |
This Study |
N/A |
pFastbac GST-TEV-FBXW11 |
This Study |
N/A |
pFastbac SEC13 |
Jin et al., 2012
|
N/A |
pFastbac His-TEV-SEC31A |
Jin et al., 2012
|
N/A |
pcDNA5 KLHL12-FLAG |
Jin et al., 2012
|
N/A |
pCS2 His-UB |
Jin et al., 2012
|
N/A |
pcDNA FRT/TO |
Thermo Fisher |
V652020 |
pDONR223 ARIH1 |
Orfeome V8.1 |
HsCD00378777 |
pOG44 |
Thermo Fisher |
V600520 |
pHAGE-Puro-C-Flag-HA |
Huttlin et al., 2015
|
N/A |
pcDNA5-FRT/TO |
Invitrogen |
Cat#V6520-20 |
pcDNA5-FRT/TO+GFP |
Kelsall et al., 2013
|
N/A |
pcDNA5-FRT/TO+GFP-ARIH1 |
Kelsall et al., 2013
|
N/A |
pcDNA5-FRT/TO+GFP-ARIH1 (C357S) |
Kelsall et al., 2013
|
N/A |
pcDNA5-FRT/TO+GFP-ARIH1 (siRNA resistant) |
This study |
N/A |
Plasmid: pcDNA5-FRT/TO+GFP-ARIH1 (F430A, E431A, E503A) |
Kelsall et al., 2013
|
N/A |
Plasmid: pcDNA5-FRT/TO+GFP-ARIH1 (C357S, F430A, E431A, E503A) |
Kelsall et al., 2013
|
N/A |
Sequence-Based Reagents |
siGENOME Non-targeting siRNA #1 |
Dharmacon |
Cat#D-001210-01-05 |
Set of 4 upgrade: siGENOME ARIH1 siRNA; siRNA #1: GUGCUGGAGUGAAUAUUUA; siRNA #2: CGAGAUAUUUCCCAAGAUU; siRNA #3: ACACUUAUGUCUUCGCUUU; siRNA #4: GGAUAUGCCUUGUCAGAUC |
Dharmacon |
Cat#MU-019984-00-0002 |
Silencer Select Pre-Designed siRNA ARIH1: siRNA ID: s223658; siRNA #5: ACACGAAAUAGUGUGACCCat |
Thermo Fisher |
Cat#4392420 |
Silencer Select Pre-Designed siRNA ARIH1: siRNA ID: s223660; siRNA #6: UUCCAUCAAAGUACCUUUCca |
Thermo Fisher |
Cat#4392420 |
FlexiTube GeneSolution GS25820 for ARIH1; siRNA #7: CTGCTACTTGAACTACCCTAA; siRNA #8: CTGCGCTTTGAGCACAAACTA; siRNA #9: GCGCCTGATCACAGATTCAAA; siRNA #10: TAGAGTGCAATCGACTGTTAA |
QIAGEN |
Cat#GS25820 |
Software and Algorithms |
Prism |
GraphPad |
ver 5; RRID: SCR_002798 |
R statistical package |
http://www.rproject.org/
|
ver 3.2.3; RRID: SCR_001905 |
Bioconductor |
https://www.bioconductor.org
|
ver 3.3; RRID: SCR_006442 |
Other |
DMEM, high glucose, pyruvate |
Thermo Fisher |
Cat#11995-073 |
Lipofectamine 3000 |
Life Technologies |
Cat#L3000008 |
Lipofectamine RNAi Max |
Life Technologies |
Cat#13778075 |
FxCycle PI/Rnase Staining Solution |
Life Technologies |
Cat#F10797
|
C-18 Empore extraction Disks |
Thermo Fisher |
Cat#14-386-2 |