Table 1.
Genetic features of VDAC1-3 based on Aceview (a) and Ensemble (e) databases. Superscript a or e letters refer to Aceview or Ensemble databases. Numbers in columns 1 and 3 without any superscription had been annotated by both databases. Paralogues and orthologues had been annotated only in Ensemble and polyadenylation prediction had been predicted only by Aceview.
Protein | Chromosome | Reconstructed splice variants (#) |
Predicted length (aa #) | Length of NP-coded protein (aa#) |
Paralogues (Ensemble) |
Orthologues (Ensemble) |
Polyadenylation prediction (AceView) |
---|---|---|---|---|---|---|---|
hVDACl | 5 | 18a, 7e | 283, 184, 351a, 320a, 315a, 258a, 250a, 155a,... | 283 | 2 | 79 | 11 |
→ hVDAC2 | 10 | 13a, 14e | 309, 294, 322a, 255a, 245a, 209a, 164a, 119a, 104a, 106a, 90a... 204e, 195e, 109e,... | 309, 294 | 2 | 80 | 10 |
hVDAC3 | 8 | 10a, 12e | 184a, 194a, 152a, 95a, 63a, 58a, 52a, 283e, 134e, 100e, 284e, 108e, 57e, 165e, 159e, 63e | 283, 284 | 2 | 85 | 6 |
mVDACl | 11 | 3a, 5e | 381a, 121a, 68a, 283e, 254e, 296e | 283 | 3 | 84 | 3 |
→ mVDAC2 | 14 | 11a, 9e | 295, 280a, 223a, 124a, 117a, 86a, 75a, 71a, 77a, 53a, 283e, 75e, 201e | 295 | 3 | 82 | 4 |
mVDAC3 | 8 | 6a, 2e | 381a, 277a, 236a, 108a, 100a, 99a, 63a, 55a, 44a, 32a, 283e, 284e | 283 | 3 | 85 | 4 |