Table 1. Overview of the conserved regions found in the catalytic domain of MaAmyB and their identity and similarity with either all identified homologs, or the GH13_42 homologs only.
Conserved region | Position in MaAmyB | Size | Sequences found | Identity | Similarity | E-value |
---|---|---|---|---|---|---|
Region-B | 768–896 | 128 aa | 164 | 48–79% (59%) | 57–83% (68%) | <1∙10−41 |
Region-A, insert 1 | 961–979 | 19 aa | 164 | 78–100% (86%) | 83–100% (89%) | <1∙10−5 |
Region-A, insert 2 | 1,005–1,041 | 37 aa | 205 | 44–81% (68%) | 53–86% (73%) | <1∙10−4 |
C-region-like dom. | 1,194–1,259 | 66 aa | 234 | 32–75% (62%) | 40–91% (81%) | < 1∙10−13 |
Region-A, insert 2 | 1,005–1,041 | 37 aa | 164* | 61–81% (71%)* | 67–86% (75%)* | <1∙10−6 |
C-region-like dom. | 1,194–1,259 | 66 aa | 164* | 52–75% (63%)* | 75–91% (82%)* | <1∙10−15 |
The ranges are given for the percentage identity and similarity, as well as the average values, which are shown between brackets.
*values based on GH13_42 homologs only.