Table 3. Cassava brown streak virus (CBSV) amino acid (AA) sites under positive selection (analyses method: SLAC Hy-Phy).
| Gene | CBSV AA site under positive selection |
|---|---|
| P1 | 44, 46, 50, 174, 224, 230, 250, 283, 288, 349, 358 |
| P3 | 415, 455, 467, 472, 499, 525, 618 |
| 6K1 | 658, 678 |
| CI | 735, 761, 820, 827, 848, 852, 894, 935, 1218 |
| VPg | 1465 |
| NIa | 1620, 1645, 1704, 1754, 1785 |
| Nib | 1879, 1880, 1890, 1907, 1929, 2109, 2145, 2156, 2161, 2285 |
| HAM1 | 2320, 2345, 2404, 2432, 2453, 2475, 2519 |
| CP | 2550, 2555, 2588, 2611, 2631, 2635, 2640, 2659, 2728, 2745, 2783, 2818, 2843, 2860, 2877, 2884 |
There were no sites under positive selection for Ugandan cassava brown streak virus (UCBSV).