Extended Data Table 4.
Transposable Elements (TEs) found within the Yb region.
| Unique Occurrences |
|||||||||
| BAC | mel | ros | ama | agl | No. | TE name | Superfamily | Type | |
| 1 | 1 | BEL-1 | BEL | LTR retrotransposon | |||||
| 1 | CR1-2 | Jockey | LINE | Non-LTR retrotransposon | |||||
| 1 | 1 | Daphne-1 | Jockey | LINE | Non-LTR retrotransposon | ||||
| 1 | 1 | Daphne-6 | Jockey | LINE | Non-LTR retrotransposon | ||||
| 1 | 1 | DNA-like-8 | DNA transposon | ||||||
| 1 | Helitron-like-14 | Helitron_A | DNA transposon | ||||||
| 1 | 2 | 4 | Helitron-like-12 | Helitron_A | DNA transposon | ||||
| 1 | 2 | 5 | Helitron-like-12b | Helitron_A | DNA transposon | ||||
| 1 | 1 | 1 | 1 | 7 | Helitron-like-4a | Helitron_A | DNA transposon | ||
| Helitron-like-4b | Helitron_A | DNA transposon | |||||||
| Helitron-N2 | Helitron_A | DNA transposon | |||||||
| 3 | Helitron-like-7 | Helitron_A | DNA transposon | ||||||
| 5 | 3 | 3 | 1 | 2 | 16 | Helitron-like-6a | Helitron_B | DNA transposon | |
| Helitron-like-6b | Helitron_B | DNA transposon | |||||||
| Helitron-like-11 | Helitron_B | DNA transposon | |||||||
| 2 | 2 | 1 | 1 | 11 | Helitron-like-15 | Helitron_B | DNA transposon | ||
| 6 | 5 | 3 | 1 | 18 | Helitron-like-5 | Helitron_B | DNA transposon | ||
| 1 | 2 | Hmel_Unknown_50 | |||||||
| 1 | 1 | 2 | Hmel_Unknown_174a/b | ||||||
| 1 | 1 | Hmel_Unknown_187b | |||||||
| 1 | 1 | 2 | Hmel_Unknown_230 | ||||||
| 1 | Hmel_Unknown_234a | ||||||||
| 1 | Hmel_Unknown_236a | ||||||||
| 1 | 1 | Jockey-4 | Jockey | LINE | Non-LTR retrotransposon | ||||
| 1 | 1 | LTR-3_gypsy | Gypsy | LTR retrotransposon | |||||
| 1 | 1 | Mariner-4 | Mariner/Tc1 | DNA transposon | |||||
| 1 | 3 | 29 | Metulj-0 | Metulj | SINE | Non-LTR retrotransposon | |||
| Metulj-1 | Metulj | SINE | Non-LTR retrotransposon | ||||||
| Metulj-2 | Metulj | SINE | Non-LTR retrotransposon | ||||||
| Metulj-3 | Metulj | SINE | Non-LTR retrotransposon | ||||||
| Metulj-4 | Metulj | SINE | Non-LTR retrotransposon | ||||||
| Metulj-5 | Metulj | SINE | Non-LTR retrotransposon | ||||||
| Metulj-6 | Metulj | SINE | Non-LTR retrotransposon | ||||||
| Metulj-7 | Metulj | SINE | Non-LTR retrotransposon | ||||||
| nTc3-4 | Mariner/Tc1 | DNA transposon | |||||||
| SINE-1 | SINE | SINE | Non-LTR retrotransposon | ||||||
| 1 | 1 | 2 | nMar-3 | Mariner/Tc1 | DNA transposon | ||||
| 1 | 1 | nMar-16 | Mariner/Tc1 | DNA transposon | |||||
| 1 | 1 | nMar-12/20 | Mariner/Tc1 | DNA transposon | |||||
| 1 | 1 | nPIF-3 | PIF/Harbinger | DNA transposon | |||||
| 1 | 1 | nTc3-2 | Mariner/Tc1 | DNA transposon | |||||
| 1 | 2 | nTc3-3 | Mariner/Tc1 | DNA transposon | |||||
| 1 | 2 | R4-1 | R2 | LINE | Non-LTR retrotransposon | ||||
| 1 | 1 | 6 | Rep-1 | REP | LINE | Non-LTR retrotransposon | |||
| 2 | 1 | 1 | 4 | RTE-3 | RTE | LINE | Non-LTR retrotransposon | ||
| 1 | 2 | RTE-11 | RTE | LINE | Non-LTR retrotransposon | ||||
| 1 | 3 | Zenon-1 | Jockey | LINE | Non-LTR retrotransposon | ||||
| 1 | 1 | Zenon-3 | Jockey | LINE | Non-LTR retrotransposon | ||||