Table 2. nDNA SNPs that associate with the African-Caucasian differences in mtDNA expression from the long RNA dataset.

Chromosome	SNP accession number	nDNA Gene	SNP location in the nDNA gene	mtDNA gene with altered expression	*p-value
7	rs28495024	PTCD1	UTR-3	ND2	4.84e-8
7	rs28495024	PTCD1	UTR-3	CO2	3.86e-7
7	rs2003499	PTCD1	UTR-3	CO2	2.89e-6
17	rs16967742	MRPS7	UTR-5	ND2	8.38e-7
17	rs16967742	MRPS7	UTR-5	CO2	4.36e-6
2	rs6739788	PNPT1	UTR-3	CO2	2.11e-6
2	rs7594497	PNPT1	Exon N>D	CO1	2.41e-6
2	rs7594497	PNPT1	Exon N>D	CO2	3.14e-6
3	rs667894	HEMK1	UTR-3	ND2	2.38e-6
3	rs667894	HEMK1	UTR-3	CO1	4.02e-6
3	rs667894	HEMK1	UTR-3	CO2	2.71e-6
3	rs667894	HEMK1	UTR-3	ND6	5.27e-6
4	rs10938024	GRSF1	UTR-3	ND2	2.90e-6
4	rs7694924	GRSF1	UTR-3	ND2	5.12e-6

*P-values were calculated using the Matrix eQTL R-package.