Table 1.
Annotations of the P. ovis transcriptome. The percentage, in a database, equals the number of unigenes that were annotated successfully accounted for the proportion of the total number of unigenes
| Number of unigenes | Percentage (%) | |
|---|---|---|
| Annotated in NR | 12,121 | 31.21 |
| Annotated in NT | 7,681 | 19.77 |
| Annotated in KO | 6,624 | 17.05 |
| Annotated in SwissProt | 10,805 | 27.82 |
| Annotated in PFAM | 12,157 | 31.3 |
| Annotated in GO | 13,213 | 34.02 |
| Annotated in KOG | 7,798 | 20.07 |
| Annotated in all databases | 2,330 | 5.99 |
| Annotated in at least one database | 17,366 | 44.71 |
| Total unigenes | 38,836 |
Abbreviations: NR NCBI non-redundant protein sequences, NT NCBI nucleotide sequences, KO KEGG orthology, SwissProt a manually annotated and reviewed protein sequence database, PFAM protein family, GO gene ontology, KOG the euKaryotic Ortholog Groups database