Table 1. Data collection and refinement statistics.
Streptavidin selenobiotin (XFEL) | |
---|---|
Data collection | PDB ID (5JD2) |
Beamline | LCLS (CXI) |
Space group | P21 |
Cell dimensions | |
a, b, c (Å) | 50.7, 98.4, 53.1 |
α, β, γ (°) | 90, 112.7, 90 |
Rsplit | 0.048 (0.395) |
I/σ(I) | 14.0 (2.7) |
Completeness (%) | 1.0 (1.0) |
SFX multiplicity of observations | 1447.6 (1003.3) |
CC* | 1.000 (0.930) |
CC1/2 | 0.998 (0.762) |
CCano | 0.177 (0.003) |
Wilson B Factor (Å2) | 29.58 |
Refinement | |
Resolution (Å) | 32.51–1.90 (1.97–1.90) |
No. of reflections | 38,327 (3,817) |
Rwork/Rfree | 0.166/0.199 (0.231/0.253) |
Ramachandran favoured (%) | 89.3 |
Ramachandran allowed (%) | 10.5 |
Ramachandran outliers (%) | 0.2 |
No. of atoms | |
Protein | 3,630 |
Ligand/ion | 64 |
Water | 265 |
B-factors (Å2) | |
Protein | 34.0 |
Ligand/ion | 38.9 |
Water | 43.5 |
Root-mean-square deviations | |
Bond lengths (Å) | 0.006 |
Bond angles (°) | 1.04 |
*Values in parentheses are for highest-resolution shell.