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. 2016 Aug 2;11(1):43–55. doi: 10.1038/ismej.2016.109

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Copyright © 2017 International Society for Microbial Ecology

This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article's Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/

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The bacterial root microbiota of A. alpina is similar compared with A. thaliana and Cardamine hirsuta. (a) Constrained principal coordinates analysis (PCoA) based on the Bray–Curtis distances on the 36 samples of the ‘diversification' experiment constrained by sample groups. (b) OTUs enriched on roots of A. alpina, C. hirsuta and A. thaliana. Color-coded in black are root-enriched OTUs (RootOTUs). All enriched OTUs are based on a Bayes moderated t-test, P<0.05 (FDR-corrected). Number in brackets: total number of OTUs enriched in the respective plant species. (c) Pie chart reporting family distribution of 18 shared OTUs based on parametric Tukey's honest significant difference and Bayesian and non-parametric Mann-Whitney statistics.