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. 2016 Nov 8;6:35371. doi: 10.1038/srep35371

Table 2. Most significant interactions associated with AF (P < 5 × 10−7).

AF SNP
Interacting SNP
Interaction effects
Replication
SNP Closest gene SNP Locus Closest gene Location Coding allele CAF$ Meta P value OR+ 95% CI* P value OR+ 95% CI* P value
rs7164883 HCN4 rs4980345 15q25.3 SLC28A1 Intron T 0.06 0.78 1.44 1.27–1.65 4.3 × 10−8 0.94 0.74–1.20 0.64
rs10821415 C9orf3 rs1492056 3p14.1 MITF Intergenic A 0.43 0.37 1.15 1.09–1.21 1.4 × 10−7 0.91 0.84–0.99 0.04
rs12415501 NEURL rs699801 1p31.1 CRYZ Intergenic T 0.45 0.83 1.19 1.12–1.27 1.9 × 10−7 1.01 0.90–1.13 0.91
rs2106261 ZFHX3 rs12652090 5q34 TENM2 Intergenic A 0.11 0.43 1.31 1.18–1.45 2.1 × 10−7 1.02 0.87–1.20 0.80
rs1448818 PITX2 (2) rs693832 8p21.1 MIR3622B Intergenic C 0.11 0.36 1.27 1.16–1.39 3.1 × 10−7 1.03 0.89–1.19 0.72
rs3807989 CAV1 rs3802477 9q22.33 GABBR2 Intron C 0.05 0.30 1.35 1.20–1.52 3.6 × 10−7 1.05 0.86–1.27 0.64
rs3807989 CAV1 rs2327995 6p22.3 ATXN1 Intron G 0.27 0.74 1.15 1.09–1.22 4.3 × 10−7 1.05 0.95–1.15 0.32
rs1448818 PITX2 (2) rs2328452 20p11.23 RIN2 Intergenic G 0.88 0.92 1.25 1.15–1.37 4.7 × 10−7 0.94 0.82–1.08 0.37
rs12415501 NEURL rs7946907 11p15.2 SPON1 Intron A 0.54 0.05 1.18 1.11–1.26 4.7 × 10−7 1.07 0.96–1.20 0.23

$CAF: coding allele frequency; +OR: odds ratio; *CI: confidence interval.