Table 5. Missing Proteins Potentially Identified Using Proteotypic Peptide Candidates in the HEK293 Cell Line or in Chromosome 16.
| Protein | Name | Chr | no. PSMs | no. Peptides | Ion score | HPP guidelines (2 proteotypic peptides) | Sample |
|---|---|---|---|---|---|---|---|
| NX_A6NJT0 | UNCX | 7 | 8 | 4 | 113.22 | HEK | |
| NX_B2RXH8 | HNRNPCL2 | 1 | 276 | 15 | 102.61 | HEK,Retina | |
| NX_Q9BQ87 | TBL1Y | Y | 76 | 10 | 100.66 | HEK | |
| NX_Q2VIQ3 | KIF4B | 5 | 46 | 19 | 99.77 | √ | HEK |
| NX_Q6IS14 | EIF5AL1 | 10 | 298 | 17 | 95.03 | √ | HEK |
| NX_Q5T2N8 | ATAD3C | 1 | 56 | 8 | 85.06 | √ | HEK,Retina |
| NX_Q56UQ5 | - | X | 55 | 4 | 81.79 | √ | HEK |
| NX_Q8TD57 | DNAH3 | 16 | 27 | 25 | 80.77 | √ | Spermatozoa,Retina |
| NX_Q6URK8 | TEPP | 16 | 17 | 10 | 79.62 | Spermatozoa | |
| NX_Q9NRJ5 | PAPOLB | 7 | 10 | 3 | 77.63 | √ | HEK |
| NX_Q6ZR08 | DNAH12 | 3 | 34 | 23 | 75.04 | √ | Placenta,HEK,Spermatozoa |
| NX_A8K0S8 | MEIS3P2 | 17 | 6 | 1 | 58.75 | √ | HEK |
| NX_Q6ZMV8 | ZNF730 | 19 | 3 | 3 | 58.21 | √ | HEK |
| NX_Q14585 | ZNF345 | 19 | 1 | 1 | 57.3 | √ | HEK |
| NX_Q52M93 | ZNF585B | 19 | 1 | 1 | 54.08 | √ | HEK |
| NX_Q9UJN7 | ZNF391 | 6 | 4 | 3 | 53.79 | √ | HEK |
| NX_P58180 | OR4D2 | 17 | 3 | 1 | 52.28 | √ | HEK,Spermatozoa |
| NX_Q8NGL6 | OR4A15 | 11 | 3 | 1 | 52.28 | Spermatozoa,HEK | |
| NX_P59817 | ZNF280A | 22 | 1 | 1 | 48.17 | HEK | |
| NX_A6NHN6 | NPIPB15 | 16 | 7 | 5 | 47.7 | √ | Spermatozoa |
| NX_Q9Y2H8 | ZNF510 | 9 | 1 | 1 | 45.02 | HEK | |
| NX_Q96KX1 | C4orf36 | 4 | 1 | 1 | 44.7 | √ | HEK |
| NX_Q96M86 | DNHD1 | 11 | 1 | 1 | 44.16 | HEK | |
| NX_Q5VTU8 | ATP5EP2 | 13 | 1 | 1 | 43.65 | √ | HEK |
| NX_Q8N0W5 | IQCK | 16 | 1 | 1 | 43.57 | √ | Spermatozoa |
| NX_Q4AC99 | ACCSL | 11 | 1 | 1 | 43.57 | √ | HEK |
| NX_A6NNF4 | ZNF726 | 19 | 2 | 1 | 43.39 | √ | HEK |
| NX_P0CW27 | CCDC166 | 8 | 1 | 1 | 40.88 | √ | HEK |
| NX_A6NCM1 | IQCA1L | 7 | 1 | 1 | 40.63 | √ | HEK |
| NX_Q8NDH2 | CCDC168 | 13 | 1 | 1 | 40.58 | √ | HEK |
| NX_Q6R2W3 | ZBED9 | 6 | 1 | 1 | 40.51 | √ | HEK |
| NX_A6NN73 | GOLGA8CP | 15 | 1 | 1 | 40.35 | √ | HEK |
| NX_Q9H2H0 | CXXC4 | 4 | 1 | 1 | 39.19 | √ | HEK |
| NX_Q9BXX2 | ANKRD30B | 18 | 3 | 2 | 39.01 | √ | Aorta,HEK |