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. 2016 Sep 12;13(11):1166–1173. doi: 10.1080/15476286.2016.1229735

Table 1.

Protospacer L2S1 carrying multiple base pair mismatches at positions 1 to 10. Averaged transformation efficiencies (TE) from triplicate experiments were normalized to values for the control plasmid constructs set to 100%. The sizes of CRISPR deletions detected in surviving transformants are shown with the repeat (r) extremities. 0 - no deletion detected. n.d. not determined. The major annealing site is centered on the shaded positions.

Construct 1A 2C 3A 4C 5T 6G 7G 8G 9C 10G TE (%) CRISPR deletion
1 C T                 < 0.1 r1-r63
2 C A G               < 0.1 r1-r63
3 C T G               0.1 r1-r80
4 C T G T             0.2 r1-r70
5 C T G G             1.1 r1-r80
6 C T G A             13 0
7 T G T               < 0.1 n.d.
8 T G T G             12 0
9 C T G A C           17 0
10 T G T G A           24 0
11   G T G A           9 0
12   G T G A C         17 0
13     T G A C C       79 0
14       G A C         10 0
15         A C C C     0.1 n.d.
16           C C C G C < 0.1 n.d.
17             C C G   < 0.1 n.d.