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. Author manuscript; available in PMC: 2017 Oct 1.
Published in final edited form as: Mamm Genome. 2016 May 23;27(9-10):495–502. doi: 10.1007/s00335-016-9644-9

Table 1.

Genotypes for the nuclear family are reported for polymorphic SNPs (CanFam2) representing each of the 10 candidate genes

Gene (Chr) SNP position graphic file with name nihms792853t1.jpg
TNNT1 (1) 105264488 AG AG GG GG AG
105432142 GG AG AG AG GG
105598975 GG CG CG CG GG
106497529 AG AG AA AA AG
ACTA1 (4) 12713391 AG AA AG AG AA
12875911 AG AA AG AG AA
TPM3 (7) 45997866 CC AC CC CC CC
46022207* AT AA AA AT AT
46034262* AC AA AA AC AC
46049585* AG AG AA AG AG
46303991 CC AC CC CC CC
CFL2 (8) 16507437 CC AC CC AC CC
16587360 GG AG GG AG GG
TPM2 (11) 55241525* AC CC CC AC AC
55248320* AA AG AA AG AA
NEB (19) 55761948* GG AG GG GG GG
55777049* GG AG GG GG GG
55824838* AG AG AA AA AG
LMOD3 (20) 25536336 AG AA AA AA AG
25605665 AA GG AG AG AG
25625642 AG AA AA AA AG
KLHL40 (23) 14709678 AC AA AC AC AC
14867876 AG GG AG AG AG
KBTBD13 (30) 32370798 AG GG GG GG AG
32443189 AG GG GG GG AG
32458624 AC AA AA AA AC
KLHL41 (36) 17244342 AG AA AA AA AG
17280474 AG GG AG AG GG

When possible, SNPs lying within the gene are used (asterisks); otherwise, the most proximal flanking SNPs are reported. When present, flanking SNPs (within 1 Mb) for which the affected dogs are homozygous are also shown. SNPs fitting a recessive pattern of inheritance are highlighted in bold