Skip to main content
. 2016 Aug 31;44(19):9413–9425. doi: 10.1093/nar/gkw743

Table 3. Modification detection by SMRT sequencing.

Enzyme MTase construct m6A%detected m4C%detected Coverage
PacII RCAAY CCC
Native organism 95.4 84.5 41X
M1 + M2 + S 93.7 63.0 30x
M1-APPA + M2 + S 56.6 43x
M1 + M2-APPA + S 90.7 24.9 36x
M1 + S 61.7 81x
M2 + S 90x
BceNI GAG CCC
Native organism 97.4 66.4 38x
M1 + M2 + S 98.6 90.2 49x
M1-APPA + M2 + S 45.5 60x
M1 + M2-APPA + S 82.3 52x
M1 + S 46.6 40x
M2 + S 90x
Mma5219I GCA TCY
Native organism 94.0 72.4 42x
M1 + M2 + S 73.4 33.0 26x
M1-APPA + M2 + S 29x
M1 + M2-APPA + S 89.6 51x
M1 + S 80.2 40x
M2 + S 65x
DbaKI GAAG GCC
Native organism 91.9 68.8 29x
M1 + M2 + S 100 97.7 46x
M1-APPA + M2 + S 100 144x
M1 + M2-APPA + S 100 98.7 99x
M1 + S 35.9 60x
M2 + S 51x

M-APPA indicates catalytic mutant (NPPF or NPPY to APPA) of the indicated MTase subunit.