Table 1. Design of I10H Analogues.
KLK5 Motifs a | I10H Analogues b | Modification | Potential Interactions |
---|---|---|---|
HPGHS (green region Fig 2) | GRCTKSIPPHCYPD | F→Y (F12Y) | hydrogen bond between hydroxyl of tyrosine and nitrogen of histidine |
HPGHS (green region Fig 2) | GRCTKSIPPHCWPD | F→W (F12W) | π-π stacking between tryptophan and histidine or hydrogen-π interaction |
PNQLY (blue region Fig 2) | GRCTKSKPPHCFPD | I→K (I7K) | hydrogen bond between NH of lysine and C = O of asparagine side chain |
SWGDYP (red region Fig 2) | NRCTKSIPPHCFPD | G→N (G1N) | hydrogen bond between C = O of aspartate and NH of asparagine side chain |
The Substrate Pocket (magenta region Fig 2) | GRCTRSIPPHCFPD | K→R (K5R) | Substrate binding pocket of KLK5 is predicted to have preference for arginine [33] |
a Letters in bold are the amino acid residues that were expected to form the interactions.
b Letters in bold are the additional substitutions on the I10H sequence.