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. 2016 Nov 3;167(4):1028–1040.e15. doi: 10.1016/j.cell.2016.10.005
REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies

Rabbit polyclonal anti-GFP Generated in-house N/A
Mouse monoclonal anti-MIS12 Generated in-house #QA21-74-4-3
Rabbit polyclonal anti-CENP-C Trazzi et al., 2009 #SI410
Mouse monoclonal anti-Vinculin Sigma-Aldrich Cat#V9131; RRID: AB_477629
Rabbit polyclonal anti-KNL1-N Generated in-house #SI0787
Mouse monoclonal anti-HEC1 GeneTex Cat#GTX70268; RRID: AB_371632
Rabbit polyclonal anti-CENP-T/W Generated in-house #SI0882
Mouse monoclonal anti-DSN1 Generated in-house #RC11-3(40)
Sheep anti-mouse HRP Amersham Cat#NXA931-1ML; RRID: AB_772209
Donkey anti-rabbit HRP Amersham Cat#NXA934-1ML
Human anti-centromere (CREST) Antibodies Inc. Cat#15-234-0001
Goat anti-human Alex Fluor 647 Invitrogen Cat#A-21445; RRID: AB_2535862

Chemicals, Peptides, and Recombinant Proteins

GST-Prescission (3C protease) Musacchio Lab N/A
Endoproteinase Asp-N Sigma Aldrich Cat#000000011420488001
Lysyl Endopeptidase Wako Cat#125-05061
Ndc80C Petrovic et al., 2014 N/A
KNL1C Petrovic et al., 2014 N/A
Zwint1 Musacchio Lab N/A
Protease-inhibitor mix HP Plus Serva Cat#39107
PhosSTOP phosphatase inhibitors Roche Cat#04906845001
DNaseI Roche Cat#13146700
FAM-CENP-C 1-21 GenScript N/A
FAM-GGGK GenScript N/A
Sortase A (S.pyogenes) Hidde Ploegh Lab Addgene:Cat#51139
Sortase A delta 59 (S.aureus) Hidde Ploegh Lab Addgene:Cat#51138
Zeocin Invitrogen Cat#R25001
Doxycycline Sigma Cat#D9891;
CAS: 24390-14-5
Nocodazole Sigma Cat#M1404;
CAS: 31430-18-9
L-glutamine PAN Biotech P04-80100
DAPI Serva Cat#18860.01
Poly-L-Lysine Sigma Aldrich Cat#P4832;
CAS: 25988-63-0
Bissulfosuccinimidylsuberate (BS3) Creative Molecules Cat#001SS
Urea Sigma-Aldrich Cat#U6504;
CAS: 57-13-6
4-(4,6-Dimethoxy-1,3,5-triazin-2-yl)-4-methylmorpholinium chloride (DMTMM) Sigma Aldrich Cat#74104;
CAS: 3945-69-5
Acetonitrile Fluka Cat#34967;
CAS: 75-05-8
Trypsin Promega Cat#V511
Ammonium Bicarbonate (Ambic) Fluka Cat#C990X98;
CAS: 1066-33-7
Trifluoroacetic acid (TFA) Sigma Aldrich Lot#RB228879;
CAS: 76-05-1
Tris(2-carboxyethyl)phosphine hydrochloride (TCEP-HCl) Pierce Cat#20490; CAS: 51805-45-9
Iodoacetamide
Sigma Aldrich
Cat#I6125;
CAS: 144-48-9

Critical Commercial Assays

JBS Floppy-Choppy Jena Bioscience Cat#CO-110
JBS Tantalum Cluster Derivitization Kit Jena Bioscience Cat#PK-103
JSCG Core Suites QIAGEN Cat#130724;130725;130726;30727

Deposited Data

MIS12/CENP-C full-length structure This study PDB:5LSK
MIS12Δhead2 structure This study PDB:5LSJ
Head2 structure This study PDB:5LSI

Experimental Models: Cell Lines

Trichoplusia ni:BTI-Tnao38 Garry W Blissard Lab N/A
S.frugiperda:Sf9 cells in Sf900™ III SFM ThermoFisher Cat#:12659017
Human: Flp-In T-Rex HeLa S.S. Taylor, University of Manchester N/A
Human: Flp-In T-Rex HeLa-MIS12 This paper N/A
Human: Flp-In T-Rex HeLa-MIS12 YFF This paper N/A
Human: Flp-In T-Rex HeLa-MIS12 4D/EA This paper N/A

Experimental Models: Organisms/Strains

E.coli:BL21-CodonPlus(DE3)-RIL strain Agilent Technologies #230240
E.coli:One Shot OmniMAX 2 T1R Chemically Competent Cells ThermoFisher #C854003
E.coli:BL21-CodonPlus(DE3)-RIPL strain Agilent Technologies #230280

Recombinant DNA

pGEX-2rbs Musacchio Lab
MultiBac Geneva Biotech N/A
pST39 Tan et al., 2005 N/A
pST39-MIS12C This study N/A
pST39-MIS12C YFF This study N/A
pST39-MIS12C MIS12-2D/EA This study N/A
pST39-MIS12C MIS12-2E/DA This study N/A
pST39-MIS12C MIS12-4D/EA This study N/A
pST39-MIS12C NSL1-DED/AAA This study N/A
pST39-MIS12C Δ100-109 This study N/A
pST39-MIS12C DSN1-RRAA This study N/A
pST39-MIS12C DSN1-RRKAAA This study N/A
pST39-MIS12C Δhead1 This study N/A
pST39-MIS12C Δhead2 This study N/A
pGEX-2rbs-Head1 This study N/A
pGEX-2rbs-Head2 This study N/A
pGEX-CENP-C 1-71 Screpanti et al., 2011 N/A
pCDNA 5/FRT/TO plasmid Invitrogen Cat#V6520-20
pcDNA 5/FRT/TO EGFP Krenn et al., 2012 N/A
pcDNA 5/FRT/TO EGFP-MIS12 This study N/A
pcDNA 5/FRT/TO EGFP-MIS12 YFF This study N/A
pcDNA 5/FRT/TO EGFP-MIS124D/EA This study N/A
pFL-MIS12:PMF1 This study N/A
pUCDM-NSL1:DSN1 This study N/A

Software and Algorithms

Origin OriginLab www.originlab.com
ImageJ 1.46 r NIH https://imagej.nih.gov/ij/
Imaris 7.3.4 32-bit Bitplane http://www.bitplane.com/imaris
GraphPad Prism 6.0 GraphPad software http://www.graphpad.com
Coot Emsley et al., 2010 http://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/
UCSF Chimera Pettersen et al., 2004 https://www.cgl.ucsf.edu/chimera
Phenix Adams et al., 2010 https://www.phenix-online.org
XDS Kabsch, 2010 http://xds.mpimf-heidelberg.mpg.de/
PyMol The PyMOL Molecular Graphics System, Version 1.2r3pre, Schrödinger, LLC https://www.pymol.org/
UCLA Diffraction Anisotropy Server http://services.mbi.ucla.edu/anisoscale
CCP4 package Winn et al., 2011 www.ccp4.ac.uk
xQuest/XProphet Walzthoeni et al., 2012 http://proteomics.ethz.ch/cgi-bin/xquest2_cgi/index.cgi
SHARP Bricogne et al., 2003 https://www.globalphasing.com

Other

Sep-Pak C18 Vac Cartridge, 50 mg Sorbent Waters Cat#WAT054955
Zeba Spin Desalting Columns, 7K MWCO, 0.5 mL Thermo Scientific Cat#89883
Amicon concentrators (3K/10K/30K) Millipore Cat#UFC900324;UFC901024;UFC903024
Nitrocellulose membrane GE Healthcare Cat#10600001
Mowiol mounting media Calbiochem Cat#475904
4-12% NuPAGE Bis-Tris gels Life Technologies Cat#NP0321BOX
GST-Trap FF (5 ml) GE Healthcare Cat#17-5130-01
His Trap FF (5ml) GE Healthcare Cat#17-5255-01
Superdex 75 (10/300) GL GE Healthcare Cat#17-5174-01
Superdex 75 (16/600) pg GE Healthcare Cat#28-9893-33
Superdex 200 (10/300) GL GE Healthcare Cat#17-5175-01
Superdex 200 Increase 5/150 GL GE Healthcare Cat#28-9909-45
Superdex Peptide PC 3.2/300 GE Healthcare Cat#29-0362-31
Resource Q (6 ml) GE Healthcare Cat#17-1179-01
Resource S (6 ml) GE Healthcare Cat#17-1180-01
Glutathione Affinity Resin Expedeon Cat#AGS0010
Protein G-agarose beads Amintra Cat#APG0005
Protein A-agarose beads Roth Cat#1278.1
GFP-Trap_A ChromoTek Cat#gta-20
Corning 384 Well Low Volume Black Round Bottom Polystyrene NBS Microplate Corning Cat#4514
ECL Prime western blotting system GE Healthcare Cat#RPN 2232