Antibodies |
|
Rabbit polyclonal anti-GFP |
Generated in-house |
N/A |
Mouse monoclonal anti-MIS12 |
Generated in-house |
#QA21-74-4-3 |
Rabbit polyclonal anti-CENP-C |
Trazzi et al., 2009 |
#SI410 |
Mouse monoclonal anti-Vinculin |
Sigma-Aldrich |
Cat#V9131; RRID: AB_477629
|
Rabbit polyclonal anti-KNL1-N |
Generated in-house |
#SI0787 |
Mouse monoclonal anti-HEC1 |
GeneTex |
Cat#GTX70268; RRID: AB_371632
|
Rabbit polyclonal anti-CENP-T/W |
Generated in-house |
#SI0882 |
Mouse monoclonal anti-DSN1 |
Generated in-house |
#RC11-3(40) |
Sheep anti-mouse HRP |
Amersham |
Cat#NXA931-1ML; RRID: AB_772209
|
Donkey anti-rabbit HRP |
Amersham |
Cat#NXA934-1ML |
Human anti-centromere (CREST) |
Antibodies Inc. |
Cat#15-234-0001 |
Goat anti-human Alex Fluor 647 |
Invitrogen |
Cat#A-21445; RRID: AB_2535862
|
|
Chemicals, Peptides, and Recombinant Proteins |
|
GST-Prescission (3C protease) |
Musacchio Lab |
N/A |
Endoproteinase Asp-N |
Sigma Aldrich |
Cat#000000011420488001 |
Lysyl Endopeptidase |
Wako |
Cat#125-05061 |
Ndc80C |
Petrovic et al., 2014 |
N/A |
KNL1C |
Petrovic et al., 2014 |
N/A |
Zwint1 |
Musacchio Lab |
N/A |
Protease-inhibitor mix HP Plus |
Serva |
Cat#39107 |
PhosSTOP phosphatase inhibitors |
Roche |
Cat#04906845001 |
DNaseI |
Roche |
Cat#13146700 |
FAM-CENP-C 1-21 |
GenScript |
N/A |
FAM-GGGK |
GenScript |
N/A |
Sortase A (S.pyogenes) |
Hidde Ploegh Lab |
Addgene:Cat#51139 |
Sortase A delta 59 (S.aureus) |
Hidde Ploegh Lab |
Addgene:Cat#51138 |
Zeocin |
Invitrogen |
Cat#R25001
|
Doxycycline |
Sigma |
Cat#D9891; |
CAS: 24390-14-5 |
Nocodazole |
Sigma |
Cat#M1404; |
CAS: 31430-18-9 |
L-glutamine |
PAN Biotech |
P04-80100 |
DAPI |
Serva |
Cat#18860.01 |
Poly-L-Lysine |
Sigma Aldrich |
Cat#P4832; |
CAS: 25988-63-0 |
Bissulfosuccinimidylsuberate (BS3) |
Creative Molecules |
Cat#001SS |
Urea |
Sigma-Aldrich |
Cat#U6504; |
CAS: 57-13-6 |
4-(4,6-Dimethoxy-1,3,5-triazin-2-yl)-4-methylmorpholinium chloride (DMTMM) |
Sigma Aldrich |
Cat#74104; |
CAS: 3945-69-5 |
Acetonitrile |
Fluka |
Cat#34967; |
CAS: 75-05-8 |
Trypsin |
Promega |
Cat#V511 |
Ammonium Bicarbonate (Ambic) |
Fluka |
Cat#C990X98; |
CAS: 1066-33-7 |
Trifluoroacetic acid (TFA) |
Sigma Aldrich |
Lot#RB228879; |
CAS: 76-05-1 |
Tris(2-carboxyethyl)phosphine hydrochloride (TCEP-HCl) |
Pierce |
Cat#20490; CAS: 51805-45-9 |
Iodoacetamide
|
Sigma Aldrich
|
Cat#I6125; |
CAS: 144-48-9 |
|
Critical Commercial Assays |
|
JBS Floppy-Choppy |
Jena Bioscience |
Cat#CO-110 |
JBS Tantalum Cluster Derivitization Kit |
Jena Bioscience |
Cat#PK-103 |
JSCG Core Suites |
QIAGEN |
Cat#130724;130725;130726;30727 |
|
Deposited Data |
|
MIS12/CENP-C full-length structure |
This study |
PDB:5LSK
|
MIS12Δhead2 structure |
This study |
PDB:5LSJ
|
Head2 structure |
This study |
PDB:5LSI
|
|
Experimental Models: Cell Lines |
|
Trichoplusia ni:BTI-Tnao38 |
Garry W Blissard Lab |
N/A |
S.frugiperda:Sf9 cells in Sf900™ III SFM |
ThermoFisher |
Cat#:12659017 |
Human: Flp-In T-Rex HeLa |
S.S. Taylor, University of Manchester |
N/A |
Human: Flp-In T-Rex HeLa-MIS12 |
This paper |
N/A |
Human: Flp-In T-Rex HeLa-MIS12 YFF |
This paper |
N/A |
Human: Flp-In T-Rex HeLa-MIS12 4D/EA |
This paper |
N/A |
|
Experimental Models: Organisms/Strains |
|
E.coli:BL21-CodonPlus(DE3)-RIL strain |
Agilent Technologies |
#230240 |
E.coli:One Shot OmniMAX 2 T1R Chemically Competent Cells |
ThermoFisher |
#C854003 |
E.coli:BL21-CodonPlus(DE3)-RIPL strain |
Agilent Technologies |
#230280 |
|
Recombinant DNA |
|
pGEX-2rbs |
Musacchio Lab |
|
MultiBac |
Geneva Biotech |
N/A |
pST39 |
Tan et al., 2005 |
N/A |
pST39-MIS12C |
This study |
N/A |
pST39-MIS12C YFF
|
This study |
N/A |
pST39-MIS12C MIS12-2D/EA
|
This study |
N/A |
pST39-MIS12C MIS12-2E/DA
|
This study |
N/A |
pST39-MIS12C MIS12-4D/EA
|
This study |
N/A |
pST39-MIS12C NSL1-DED/AAA
|
This study |
N/A |
pST39-MIS12C Δ100-109
|
This study |
N/A |
pST39-MIS12C DSN1-RRAA
|
This study |
N/A |
pST39-MIS12C DSN1-RRKAAA
|
This study |
N/A |
pST39-MIS12C Δhead1
|
This study |
N/A |
pST39-MIS12C Δhead2
|
This study |
N/A |
pGEX-2rbs-Head1 |
This study |
N/A |
pGEX-2rbs-Head2 |
This study |
N/A |
pGEX-CENP-C 1-71
|
Screpanti et al., 2011 |
N/A |
pCDNA 5/FRT/TO plasmid |
Invitrogen |
Cat#V6520-20 |
pcDNA 5/FRT/TO EGFP |
Krenn et al., 2012 |
N/A |
pcDNA 5/FRT/TO EGFP-MIS12 |
This study |
N/A |
pcDNA 5/FRT/TO EGFP-MIS12 YFF
|
This study |
N/A |
pcDNA 5/FRT/TO EGFP-MIS124D/EA
|
This study |
N/A |
pFL-MIS12:PMF1 |
This study |
N/A |
pUCDM-NSL1:DSN1 |
This study |
N/A |
|
Software and Algorithms |
|
Origin |
OriginLab |
www.originlab.com |
ImageJ 1.46 r |
NIH |
https://imagej.nih.gov/ij/ |
Imaris 7.3.4 32-bit |
Bitplane |
http://www.bitplane.com/imaris |
GraphPad Prism 6.0 |
GraphPad software |
http://www.graphpad.com |
Coot |
Emsley et al., 2010 |
http://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/ |
UCSF Chimera |
Pettersen et al., 2004 |
https://www.cgl.ucsf.edu/chimera |
Phenix |
Adams et al., 2010 |
https://www.phenix-online.org |
XDS |
Kabsch, 2010 |
http://xds.mpimf-heidelberg.mpg.de/ |
PyMol |
The PyMOL Molecular Graphics System, Version 1.2r3pre, Schrödinger, LLC |
https://www.pymol.org/ |
UCLA Diffraction Anisotropy Server |
|
http://services.mbi.ucla.edu/anisoscale |
CCP4 package |
Winn et al., 2011 |
www.ccp4.ac.uk |
xQuest/XProphet |
Walzthoeni et al., 2012 |
http://proteomics.ethz.ch/cgi-bin/xquest2_cgi/index.cgi |
SHARP |
Bricogne et al., 2003 |
https://www.globalphasing.com |
|
Other |
|
Sep-Pak C18 Vac Cartridge, 50 mg Sorbent |
Waters |
Cat#WAT054955 |
Zeba Spin Desalting Columns, 7K MWCO, 0.5 mL |
Thermo Scientific |
Cat#89883 |
Amicon concentrators (3K/10K/30K) |
Millipore |
Cat#UFC900324;UFC901024;UFC903024 |
Nitrocellulose membrane |
GE Healthcare |
Cat#10600001 |
Mowiol mounting media |
Calbiochem |
Cat#475904 |
4-12% NuPAGE Bis-Tris gels |
Life Technologies |
Cat#NP0321BOX |
GST-Trap FF (5 ml) |
GE Healthcare |
Cat#17-5130-01 |
His Trap FF (5ml) |
GE Healthcare |
Cat#17-5255-01 |
Superdex 75 (10/300) GL |
GE Healthcare |
Cat#17-5174-01 |
Superdex 75 (16/600) pg |
GE Healthcare |
Cat#28-9893-33 |
Superdex 200 (10/300) GL |
GE Healthcare |
Cat#17-5175-01 |
Superdex 200 Increase 5/150 GL |
GE Healthcare |
Cat#28-9909-45 |
Superdex Peptide PC 3.2/300 |
GE Healthcare |
Cat#29-0362-31 |
Resource Q (6 ml) |
GE Healthcare |
Cat#17-1179-01 |
Resource S (6 ml) |
GE Healthcare |
Cat#17-1180-01 |
Glutathione Affinity Resin |
Expedeon |
Cat#AGS0010 |
Protein G-agarose beads |
Amintra |
Cat#APG0005 |
Protein A-agarose beads |
Roth |
Cat#1278.1 |
GFP-Trap_A |
ChromoTek |
Cat#gta-20 |
Corning 384 Well Low Volume Black Round Bottom Polystyrene NBS Microplate |
Corning |
Cat#4514 |
ECL Prime western blotting system |
GE Healthcare |
Cat#RPN 2232 |