Table 1.
Length distribution of contigs, transcripts, and unigenes in Nymphaea ‘King of Siam’ petals transcriptome
Length Range | Contigs | Transcripts | Unigenes |
---|---|---|---|
200-300 | 19,842,599 (99.50 %) | 50,671 (15.40 %) | 36,424 (32.38 %) |
300-500 | 37,313 (0.19 %) | 45,986 (13.98 %) | 26,673 (23.71 %) |
500-1000 | 33,056 (0.17 %) | 60,487 (18.38 %) | 23,243 (20.66 %) |
1000-2000 | 20,027 (0.10 %) | 80,138 (24.36 %) | 14,821 (13.18 %) |
2000+ | 10,181 (0.05 %) | 91,723 (27.88 %) | 11,324 (10.07 %) |
Total number | 19,943,175 | 329,005 | 112,485 |
Total length | 845,487,394 | 490,152,433 | 94,130,265 |
N50 length | 43 | 2,418 | 1,496 |
Mean length | 42.39 | 1489.8 | 836.83 |