Table 2.
Gene Ontology functional enrichment analysis of DEGs in Nymphaea ‘King of Siam’ petals transcriptome
| Gene Ontology term | Cluter frequency | Genome frequency | P-value | Corrected p-value |
|---|---|---|---|---|
| Biological Process: oxidation-reduction process (GO:0055114) | 59 out of 406, 14.5320197044335 % | 773 out of 9953, 7.7665025620416 % | 1.65E-06 | 0.000753462 |
| Biological Process: lipid biosynthetic process (GO:0008610) | 6 out of 406, 1.47783251231527 % | 15 out of 9953, 0.150708329146991 % | 1.62E-05 | 0.007422674 |
| Biological Process: urea transmembrane transport (GO:0071918) | 4 out of 406, 0.985221674876847 % | 6 out of 9953, 0.0602833316587963 % | 3.83E-05 | 0.017522614 |
| Biological Process: anthocyanin-containing compound biosynthetic process (GO:0009718) | 5 out of 406, 1.23152709359606 % | 11 out of 9953, 0.11051944137446 % | 4.15E-05 | 0.018979757 |
| Biological Process: pattern specification process (GO:0007389) | 7 out of 406, 1.72413793103448 % | 26 out of 9953, 0.261227770521451 % | 5.98E-05 | 0.027344686 |
| Biological Process: response to light stimulus (GO:0009416) | 10 out of 406, 2.46305418719212 % | 56 out of 9953, 0.562644428815433 % | 7.55E-05 | 0.034521692 |
| Molecular Function: urea transmembrane transporter activity (GO:0015204) | 4 out of 437, 0.91533180778032 % | 6 out of 10874, 0.0551774875850653 % | 3.62E-05 | 0.009120301 |
| Molecular Function: peroxidase activity (GO:0004601) | 11 out of 437, 2.51716247139588 % | 69 out of 10874, 0.634541107228251 % | 8.64E-05 | 0.021766185 |
| Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700) | 17 out of 437, 3.89016018306636 % | 155 out of 10874, 1.42541842928085 % | 1.60E-04 | 0.040431117 |
| Molecular Function: heme binding (GO:0020037) | 18 out of 437, 4.11899313501144 % | 170 out of 10874, 1.56336214824352 % | 1.63E-04 | 0.041003922 |