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. 2016 Nov 9;11(11):e0165913. doi: 10.1371/journal.pone.0165913

Table 3. Additional individual SY genes with interesting themes or function.

Aging related pathway Selected references Number of genes SY Genes (bold font indicates increased levels in SY, non-bold font indicates decreased transcript levels)
Glycoprotein biosynthetic process or glycoprotein metabolic process Huang et al., 2009, accessed on DAVID Bioinformatics Resources 6.7 158 and202 respectively (GO) • PHLDA1
• NDST2
• ST6GAL1
• DPM3
• GCNT1
Hyaluronan synthesis pathway Gorbunova et al., 2014 N/A HAS2-AS1
NFkB targets Adler et al., 2007 610 (MSigDB) • NTRK3
• PCDH10
• OGG1
Broadband light related rejuvenation genes Chang et al., 2013 3,531 (Chang et al., 2013) • CFB
• LOC283335
• SH3BP4
• MRPS12
• ACVRL1
• PIWIL4
• DPM3
• NEK1
• ECE2
• EML3
• BAMBI
• FAM189A2
• DGKD
• SOD2
• STXBP1
• LAGE3
• NTRK3
• CCDC88A
• RASSF4
• PLEKHJ1
• PADI2
UTP11L
BAG5
CDT1

SY transcripts with known association to aging function, out of the 114 SY transcripts identified by 3’-seq that are not included in the Gene Sets depicted in Fig 5.