Table 3. Additional individual SY genes with interesting themes or function.
Aging related pathway | Selected references | Number of genes | SY Genes (bold font indicates increased levels in SY, non-bold font indicates decreased transcript levels) | |
---|---|---|---|---|
Glycoprotein biosynthetic process or glycoprotein metabolic process | Huang et al., 2009, accessed on DAVID Bioinformatics Resources 6.7 | 158 and202 respectively (GO) | • PHLDA1 • NDST2 • ST6GAL1 • DPM3 • GCNT1 |
|
Hyaluronan synthesis pathway | Gorbunova et al., 2014 | N/A | HAS2-AS1 | |
NFkB targets | Adler et al., 2007 | 610 (MSigDB) | • NTRK3 • PCDH10 • OGG1 |
|
Broadband light related rejuvenation genes | Chang et al., 2013 | 3,531 (Chang et al., 2013) | • CFB • LOC283335 • SH3BP4 • MRPS12 • ACVRL1 • PIWIL4 • DPM3 • NEK1 • ECE2 • EML3 • BAMBI • FAM189A2 |
• DGKD • SOD2 • STXBP1 • LAGE3 • NTRK3 • CCDC88A • RASSF4 • PLEKHJ1 • PADI2 • UTP11L • BAG5 • CDT1 |
SY transcripts with known association to aging function, out of the 114 SY transcripts identified by 3’-seq that are not included in the Gene Sets depicted in Fig 5.