Table 3.
Sample | Cell line | Totala | PFb | Humanc | Moused | Mouse (%)e |
---|---|---|---|---|---|---|
ExpID-88 | KLM-1 | 40315040 | 36210281 | 14306947 | 915402 | 6.01 |
ExpID-89 | Capan-1 | 42088225 | 37433177 | 18147400 | 2041946 | 10.11 |
ExpID-90 | PANC-1 | 42912362 | 38177843 | 18700371 | 2007413 | 9.69 |
ExpID-91 | PK-1 | 36841310 | 33534549 | 14071808 | 5663160 | 28.70 |
ExpID-92 | PK-8 | 37239118 | 33971461 | 15024350 | 2902408 | 16.19 |
ExpID-93 | PK-45P | 38612205 | 35070083 | 11713564 | 9796740 | 45.54 |
ExpID-94 | PK-9 | 40328852 | 36514269 | 16929209 | 2015939 | 10.64 |
ExpID-95 | MiaPaca-2 | 39641561 | 35751983 | 20439739 | 2037175 | 9.06 |
aTotal Number of reads
bNumber of reads passing Illumina’s filter
cNumber of reads assigned to human by the CASTIN system
dNumber of reads assigned to mouse by the CASTIN system
ePercentage of mouse reads, expressed by d/(c + d)