Table 3. PCR assays.
| Gene | Full gene name | Accession no. | Forward primer | Reverse primer | Amplicon size (bp) | PCR efficiencya/b* |
|---|---|---|---|---|---|---|
| cuznsod | CuZn superoxide dismutase | BG936553 | CCACGTCCATGCCTTTGG | TCAGCTGCTGCAGTCACGTT | 141 | 1.94/1.95 |
| mnsod | Mn superoxide dismutase | DY718412 | GTTTCTCTCCAGCCTGCTCTAAG | CCGCTCTCCTTGTCGAAGC | 227 | 1.96/2.06 |
| cat | Catalase | BG935638 | CCCAAGTCTTCATCCAGAAACG | CGTGGGCTCAGTGTTGTTGA | 101 | 1.90/1.97 |
| gpx1 | Glutathione peroxidase 1 | DW566563 | GCCCACCCCTTGTTTGTGTA | AGACAGGGCTCCACATGATGA | 103 | 1.85/2.05 |
| gpx3 | Glutathione peroxidase 3 | DW561212 | TTCCCCTCCAATCAGTTTGG | ATCCCCCCTCTGGAATAGCA | 123 | 1.97/2.05 |
| gr | Glutathione reductase | BG934480 | CCAGTGATGGCTTTTTTGAACTT | CCGGCCCCCACTATGAC | 61 | 2.03/1.97 |
| g6pd | Glucose-6-Phosphate dehydrogenase | > Contig7869_Atlantic_salmon | CTTTGGGCCAATCTGGAACA | TCCCGGATGATTCCAAAGTC | 114 | 2.08/2.00 |
| nfe2l2 | Nuclear factor (erythroid-derived 2)-like 2 | BT044699 | TCGCTGAAGGAGGAGAAGGA | GTCCCTCAGCAGACGGAAAA | 120 | 1.83/2.05 |
| gclc | Glutamate-Cysteine ligase, catalytic subunit | > Contig16361_Atlantic_salmon | CGTCCTGCTCACCAGGGTTA | GCCCTCTTGGACTGCATTTC | 112 | 1.93/2.00 |
| actb | Beta-actin | BG933897 | CCAAAGCCAACAGGGAGAA | AGGGACAACACTGCCTGGAT | 92 | 1.93/20.00 |
| ee1ab | Eukaryotic translation elongation factor 1 alpha B | BG933853 | TGCCCCTCCAGGATGTCTAC | CACGGCCCACAGGTACTG | 57 | 2.04/2.03 |
| uba52 | Ubiquitin A-52 Residue ribosomal protein fusion product 1 | NM_001141291 | CCAATGTACAGCGCCTGAAA | CGTGGCCATCTTGAGTTCCT | 110 | 2.04/- |
Note:
a = Trial 1, b = Trial 2.