FIGURE 4.

Proteins that differed significantly in abundance between the two strains (FDR 0.05). (A) Proteins identified with the MaxQuant label-free approach. (B) Proteins identified with the TMT approach. Red bars indicate proteins more abundant in P12; blue bars indicate proteins more abundant in Nic25_A. The values for the fold change are given as log₂ (upper bar). Lower bar colors represent log₁₀ FDRs and are reflected in the bar graphs. The solid lines represent the common proteins that were found in label-free and TMT approaches. A dashed line represents proteins that come from the same cag operon. Processed data can be found in Supporting Files 4 and 5.