Table 1. Data set descriptions.
Data set | Population | Subpopulation abbreviation | No. of subjects | Median heterozygosity ratio | Heterozygosity ratio SD |
---|---|---|---|---|---|
1000G | AFR | ACB | 96 | 2.00 | 0.04 |
ASW | 61 | 2.04 | 0.10 | ||
ESN | 99 | 1.92 | 0.03 | ||
GWD | 113 | 1.94 | 0.07 | ||
LWK | 99 | 1.96 | 0.02 | ||
MSL | 85 | 1.95 | 0.02 | ||
YRI | 108 | 1.92 | 0.02 | ||
AMR | CLM | 94 | 1.63 | 0.11 | |
MXL | 64 | 1.55 | 0.13 | ||
PEL | 85 | 1.31 | 0.18 | ||
PUR | 104 | 1.70 | 0.09 | ||
EUR | CEU | 93 | 1.55 | 0.02 | |
FIN | 103 | 1.52 | 0.02 | ||
GBR | 105 | 1.54 | 0.02 | ||
IBS | 104 | 1.56 | 0.03 | ||
TSI | 99 | 1.56 | 0.02 | ||
EAS | CDX | 99 | 1.31 | 0.04 | |
CHB | 99 | 1.31 | 0.02 | ||
CHS | 91 | 1.31 | 0.02 | ||
JPT | 107 | 1.31 | 0.03 | ||
KHV | 107 | 1.33 | 0.02 | ||
SAS | BEB | 86 | 1.57 | 0.03 | |
GIH | 103 | 1.55 | 0.03 | ||
ITU | 102 | 1.55 | 0.08 | ||
PJL | 96 | 1.57 | 0.09 | ||
STU | 102 | 1.54 | 0.08 | ||
BioVU | AFR | NA | 4,751 | 1.73 | 0.13 |
AMR | NA | 1,233 | 1.63 | 0.19 | |
EUR | NA | 30,851 | 1.55 | 0.07 | |
ASN | NA | 426 | 1.36 | 0.05 | |
AFR-EUR | NA | 412 | 2.16 | 0.51 |
ACB, African Caribbean in Barbados; AFR, African; AFR-EUR, African-European; AMR, American; ASN, Asian; ASW, African ancestry in Southwest United States; BEB, Bengali in Bangladesh; CDX, Chinese Dai in Xishuangbanna, China; CEU, Utah residents with Northern and Western European ancestry; CHB, Han Chinese in Bejing, China; CHS, Southern Han Chinese, China; CLM, Colombian in Medellin, Colombia; EAS, East Asian; ESN, Esan in Nigeria; EUR, European; FIN, Finnish in Finland; GBR, British in England and Scotland; GIH, Gujarati Indian in Houston; GWD, Gambian in Western Division, The Gambia; IBS, Iberian populations in Spain; ITU, Indian Telugu in the United Kingdom; JPT, Japanese in Tokyo; KHV, Kinh in Ho Chi Minh City, Vietnam; LWK, Luhya in Webuye, Kenya; MSL, Mende in Sierra Leone; MXL, Mexican Ancestry in Los Angeles; PEL, Peruvian in Lima, Peru; PJL, Punjabi in Lahore, Pakistan; PUR, Puerto Rican in Puerto Rico; SAS, South Asian; STU, Sri Lankan Tamil in the United Kingdom; TSI, Toscani in Italy; and YRI, Yoruba in Ibadan, Nigeria.