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. 2016 Nov 11;17:458. doi: 10.1186/s12859-016-1295-z

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© The Author(s). 2016

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 5 — DASP3 PDB and GenBank true positive search scores are significantly improved compared to DASP/DASP2 scores. PDB (a) and GenBank (b) DASP search scores are visualized as boxplots for true positives (left) and true negatives (right). For the PDB searches, true positives are proteins which are a part of the TuLIP group used as input to the search (members) while true negatives are proteins which are not a part of the TuLIP group used as input to the search (non-members). For the GenBank searches, true positives are proteins annotated to the subgroup in which the input proteins are annotated (members) while true negatives are proteins annotated to a different subgroup than that which the input proteins are annotated (non-members); annotations were identified from the SFLD