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. Author manuscript; available in PMC: 2017 Feb 16.
Published in final edited form as: Anal Chem. 2016 Jan 25;88(4):2132–2139. doi: 10.1021/acs.analchem.5b03692

Table 1.

Primers and Probe for NIST-Developed Assays

Assay / Target /
Locus
Primers and Probe Anneal
Temp
NEIF
Gene EIF5B
Chr 2 p11.1-q11.1
F gccaaacttcagccttctcttc
R ctctggcaacatttcacactaca
Pa tcatgcagttgtcagaagctg
62 °C
2PR4
Gene RPS27A
Chr 2 p16
F cgggtttgggttcaggtctt
R tgctacaatgaaaacattcagaagtct
Pc tttgtctaccacttgcaaagctggccttt
60 °C
NR4Q
Gene DCK
Chr 4 q13.3-q21.1
F tggtgggaatgttcttcagatga
R tcgactgagacaggcatatgtt
Pa tgtatgagaaacctgaacgatggt
60 °C
Quantifiler (Qf)
Gene hTERT
Chr 5 p15.33
F proprietary
R proprietary
Pb proprietary
60 °C
D5
STR D5S2500
Chr 5 q11.2
F ttcatacaggcaagcaatgcat
R cttaaagggtaaatgtttgcagtaatagat
Pb ataatatcagggtaaacaggg
58 °C
ND6
STR D6S474
Chr 6 q21-22
F gcatggctgagtctaaagttcaaag
R gcagcctcagggttctcaa
Pa cccagaaccaaggaagatggt
60 °C
HBB1
Gene HBB
Chr 11 p15.5
F gctgagggtttgaagtccaactc
R ggtctaagtgatgacagccgtacct
Pa agccagtgccagaagagccaagga
62 °C
ND14
STR D14S1434
Chr 14 q32.13C
F tccaccactgggttctatagttc
R ggctgggaagtcccacaatc
Pa tcagactgaatcacaccatcag
58 °C
22C3
Gene PMM1
Chr 22 q13.2
F cccctaagaggtctgttgtgttg
R aggtctggtggcttctccaat
Pc caaatcacctgaggtcaaggccagaaca
60 °C

bp: basepair, F: Forward primer, R: Reverse primer, Pa: Blackhole Plus quencher probe, Pb: Taqman MGB probe, Pc: Blackhole quencher probe, Anneal Temp: annealing temperature