Table 1.
Assay / Target / Locus |
Primers and Probe | Anneal Temp |
---|---|---|
NEIF Gene EIF5B Chr 2 p11.1-q11.1 |
F gccaaacttcagccttctcttc R ctctggcaacatttcacactaca Pa tcatgcagttgtcagaagctg |
62 °C |
2PR4 Gene RPS27A Chr 2 p16 |
F cgggtttgggttcaggtctt R tgctacaatgaaaacattcagaagtct Pc tttgtctaccacttgcaaagctggccttt |
60 °C |
NR4Q Gene DCK Chr 4 q13.3-q21.1 |
F tggtgggaatgttcttcagatga R tcgactgagacaggcatatgtt Pa tgtatgagaaacctgaacgatggt |
60 °C |
Quantifiler (Qf) Gene hTERT Chr 5 p15.33 |
F proprietary R proprietary Pb proprietary |
60 °C |
D5 STR D5S2500 Chr 5 q11.2 |
F ttcatacaggcaagcaatgcat R cttaaagggtaaatgtttgcagtaatagat Pb ataatatcagggtaaacaggg |
58 °C |
ND6 STR D6S474 Chr 6 q21-22 |
F gcatggctgagtctaaagttcaaag R gcagcctcagggttctcaa Pa cccagaaccaaggaagatggt |
60 °C |
HBB1 Gene HBB Chr 11 p15.5 |
F gctgagggtttgaagtccaactc R ggtctaagtgatgacagccgtacct Pa agccagtgccagaagagccaagga |
62 °C |
ND14 STR D14S1434 Chr 14 q32.13C |
F tccaccactgggttctatagttc R ggctgggaagtcccacaatc Pa tcagactgaatcacaccatcag |
58 °C |
22C3 Gene PMM1 Chr 22 q13.2 |
F cccctaagaggtctgttgtgttg R aggtctggtggcttctccaat Pc caaatcacctgaggtcaaggccagaaca |
60 °C |
bp: basepair, F: Forward primer, R: Reverse primer, Pa: Blackhole Plus quencher probe, Pb: Taqman MGB probe, Pc: Blackhole quencher probe, Anneal Temp: annealing temperature